RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA760904", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA760904 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28957813 28957813 PRJNA760904_P_NODE_13908_length_256_cov_1.677596_g13851_i0 PRJNA760904 13908 256 1.677596 4.29464576 Pseudomonadati 3379134 Bacteria Bacteria 58.2 1.59e-7   NR HIA23651.1 2026760 g13851 i0 39.5 2.015625 86 46 94.9 3 13 255 64 148 HIA23651.1 hypothetical protein [Fidelibacterota bacterium] diamond 516 58.5 0.994871794871795 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30306363 30306363 PRJNA760904_P_NODE_19612_length_243_cov_0.905882_g19555_i0 PRJNA760904 19612 243 0.905882 2.20129326 Fidelibacterota bacterium 2026760 Bacteria Bacteria 79 6.53e-15   NR MFQ6607774.1 2026760 g19555 i0 52.1 1.74074074074074 71 33 87.7 1 242 30 743 812 MFQ6607774.1 translation initiation factor IF-2 [Fidelibacterota bacterium] diamond 423 79 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32865753 32865753 PRJNA760904_P_NODE_840_length_819_cov_2.290885_g790_i0 PRJNA760904 840 819 2.290885 18.76234815 Fidelibacterota bacterium 2026760 Bacteria Bacteria 76.6 6.52e-12   NR MBC8196338.1 2026760 g790 i0 26.5 1.00732600732601 275 168 93 12 764 3 16 277 MBC8196338.1 hypothetical protein [Fidelibacterota bacterium] diamond 825 76.6 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;