RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA760904", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA760904 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27748329 27748329 PRJNA760904_P_NODE_4364_length_402_cov_2.659574_g4307_i0 PRJNA760904 4364 402 2.659574 10.69148748 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 177 2.71e-53   NR HYC53790.1 2838779 g4307 i0 65.1 1.92537313432836 129 44 95.5 1 389 6 4 132 HYC53790.1 enoyl-CoA hydratase-related protein [Candidatus Binatia bacterium] diamond 774 177 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31158604 31158604 PRJNA760904_P_NODE_2535_length_509_cov_2.211009_g2478_i0 PRJNA760904 2535 509 2.211009 11.25403581 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 134 1.3499999999999999e-34   NR HYC54269.1 2838779 g2478 i0 41.4 2.11001964636542 181 93 99.6 5 509 3 89 268 HYC54269.1 putative metal-binding motif-containing protein [Candidatus Binatia bacterium] diamond 1074 134 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32149324 32149324 PRJNA760904_P_NODE_4078_length_414_cov_1.469208_g4021_i0 PRJNA760904 4078 414 1.469208 6.08252112 Pseudomonadati 3379134 Bacteria Bacteria 110 2.49e-25   NR MEA2649011.1 2785449 g4021 i0 56.4 7.6231884057971 94 38 68.1 2 92 373 9 99 MEA2649011.1 hypothetical protein [Candidatus Binataceae bacterium] diamond 3156 111 0.990990990990991 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;