RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA758770", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 5 ✖

tax_kingdom 1

  • Pseudomonadati · 5 ✖

bioproject 1

  • PRJNA758770 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26957990 26957990 PRJNA758770_S_NODE_26642_length_249_cov_0.886364_g26516_i0 PRJNA758770 26642 249 0.886364 2.20704636 Bryobacterales bacterium 2026791 Bacteria Bacteria 167 1.91e-48   NR MCC6292145.1 2026791 g26516 i0 96.4 1 83 3 100 0 1 249 13 95 MCC6292145.1 pyridoxal phosphate-dependent aminotransferase [Bryobacterales bacterium] diamond 249 167 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
27874346 27874346 PRJNA758770_S_NODE_25985_length_250_cov_0.881356_g25859_i0 PRJNA758770 25985 250 0.881356 2.20339 Acidobacteriota bacterium 1978231 Bacteria Bacteria 139 1.0099999999999999e-38   NR MEJ2111699.1 1978231 g25859 i0 79.2 2.916 77 16 92.4 0 20 250 1 77 MEJ2111699.1 M48 family metallopeptidase [Acidobacteriota bacterium] diamond 729 139 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28505846 28505846 PRJNA758770_S_NODE_27127_length_249_cov_0.886364_g27001_i0 PRJNA758770 27127 249 0.886364 2.20704636 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 163 1.03e-48   NR MBX7053650.1 2283092 g27001 i0 97.6 0.987951807228916 82 2 98.8 0 2 247 68 149 MBX7053650.1 lipoyl(octanoyl) transferase LipB [Pyrinomonadaceae bacterium] diamond 246 163 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30337921 30337921 PRJNA758770_S_NODE_30252_length_245_cov_0.906977_g30126_i0 PRJNA758770 30252 245 0.906977 2.22209365 Acidobacteriota bacterium 1978231 Bacteria Bacteria 145 1.1099999999999999e-39   NR MBK6748861.1 1978231 g30126 i0 90.1 1.98367346938776 81 8 99.2 0 1 243 231 311 MBK6748861.1 DUF1501 domain-containing protein [Acidobacteriota bacterium] diamond 486 145 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31949513 31949513 PRJNA758770_S_NODE_25777_length_250_cov_0.881356_g25651_i0 PRJNA758770 25777 250 0.881356 2.20339 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 122 3.81e-31   NR MFN7976929.1 2910147 g25651 i0 79.5 1.992 83 17 99.6 0 250 2 1 83 MFN7976929.1 VWA domain-containing protein [Vicinamibacterales bacterium] diamond 498 122 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;