RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA758770", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJNA758770 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30369521 30369521 PRJNA758770_S_NODE_29452_length_246_cov_0.901734_g29326_i0 PRJNA758770 29452 246 0.901734 2.21826564 Methanomassiliicoccaceae archaeon 2052168 Archaea Archaea 178 1.1899999999999999e-54   NR HOB38662.1 2052168 g29326 i0 100 2.96341463414634 81 0 98.8 0 245 3 107 187 HOB38662.1 thiamine pyrophosphate-dependent enzyme [Methanomassiliicoccaceae archaeon] diamond 729 178 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae   Methanomassiliicoccaceae archaeon
30716480 30716480 PRJNA758770_S_NODE_27094_length_249_cov_0.886364_g26968_i0 PRJNA758770 27094 249 0.886364 2.20704636 Thermoplasmatota archaeon 2806419 Archaea Archaea 176 9.64e-50   NR MDD3494166.1 2806419 g26968 i0 100 0.987951807228916 82 0 98.8 0 3 248 162 243 MDD3494166.1 hypothetical protein [Thermoplasmatota archaeon] diamond 246 176 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;