RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA758770", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 9 ✖

tax_kingdom 1

  • Bacillati · 9 ✖

bioproject 1

  • PRJNA758770 · 9 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27400882 27400882 PRJNA758770_S_NODE_24623_length_252_cov_0.871508_g24497_i0 PRJNA758770 24623 252 0.871508 2.19620016 Armatimonadota bacterium 2033014 Bacteria Bacteria 162 5.63e-48   NR HOM72931.1 2033014 g24497 i0 100 0.988095238095238 83 0 98.8 0 250 2 37 119 HOM72931.1 SPOR domain-containing protein [Armatimonadota bacterium] diamond 249 162 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27779779 27779779 PRJNA758770_S_NODE_28484_length_247_cov_0.896552_g28358_i0 PRJNA758770 28484 247 0.896552 2.21448344 Armatimonadota bacterium 2033014 Bacteria Bacteria 140 1.26e-36   NR NLB96480.1 2033014 g28358 i0 98.6 3.35222672064777 69 1 83.8 0 247 41 817 885 NLB96480.1 hypothetical protein [Armatimonadota bacterium] diamond 828 140 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28284605 28284605 PRJNA758770_S_NODE_30846_length_244_cov_0.912281_g30720_i0 PRJNA758770 30846 244 0.912281 2.22596564 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 69.7 6.27e-13   NR MFN8138689.1 2682145 g30720 i0 100 0.418032786885246 34 0 41.8 0 141 242 1 34 MFN8138689.1 hypothetical protein [Fimbriimonadales bacterium] diamond 102 69.7 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
28884668 28884668 PRJNA758770_S_NODE_27888_length_248_cov_0.891429_g27762_i0 PRJNA758770 27888 248 0.891429 2.21074392 Armatimonadota bacterium 2033014 Bacteria Bacteria 176 4.07e-52   NR NLB97757.1 2033014 g27762 i0 100 0.991935483870968 82 0 99.2 0 3 248 63 144 NLB97757.1 hypothetical protein [Armatimonadota bacterium] diamond 246 176 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29452741 29452741 PRJNA758770_S_NODE_20350_length_269_cov_1.193878_g20224_i0 PRJNA758770 20350 269 1.193878 3.21153182 Armatimonadota bacterium 2033014 Bacteria Bacteria 199 1.07e-61   NR HPO71114.1 2033014 g20224 i0 100 2.97769516728625 89 0 99.3 0 269 3 136 224 HPO71114.1 hypothetical protein [Armatimonadota bacterium] diamond 801 199 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30021641 30021641 PRJNA758770_S_NODE_28491_length_247_cov_0.896552_g28365_i0 PRJNA758770 28491 247 0.896552 2.21448344 Armatimonadota bacterium 2033014 Bacteria Bacteria 162 9.869999999999998e-47   NR HOK52894.1 2033014 g28365 i0 100 2.97570850202429 82 0 99.6 0 1 246 258 339 HOK52894.1 glycosyltransferase [Armatimonadota bacterium] diamond 735 162 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31032840 31032840 PRJNA758770_S_NODE_27075_length_249_cov_0.886364_g26949_i0 PRJNA758770 27075 249 0.886364 2.20704636 Armatimonadota bacterium 2033014 Bacteria Bacteria 158 4.459999999999999e-47   NR HHX40042.1 2033014 g26949 i0 95.1 0.987951807228916 82 4 98.8 0 248 3 76 157 HHX40042.1 hypothetical protein [Armatimonadota bacterium] diamond 246 158 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31696574 31696574 PRJNA758770_S_NODE_31577_length_243_cov_0.917647_g31451_i0 PRJNA758770 31577 243 0.917647 2.22988221 Armatimonadota bacterium 2033014 Bacteria Bacteria 163 3.62e-49   NR HOP79609.1 2033014 g31451 i0 98.8 0.987654320987654 80 1 98.8 0 2 241 4 83 HOP79609.1 TetR/AcrR family transcriptional regulator [Armatimonadota bacterium] diamond 240 163 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31728110 31728110 PRJNA758770_S_NODE_23557_length_253_cov_0.866667_g23431_i0 PRJNA758770 23557 253 0.866667 2.19266751 Armatimonadota bacterium 2033014 Bacteria Bacteria 136 4.96e-39   NR HOK53337.1 2033014 g23431 i0 100 0.806324110671937 68 0 80.6 0 206 3 54 121 HOK53337.1 BON domain-containing protein [Armatimonadota bacterium] diamond 204 136 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;