RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA758770", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 5 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 5 ✖

bioproject 1

  • PRJNA758770 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27685240 27685240 PRJNA758770_S_NODE_28664_length_247_cov_0.896552_g28538_i0 PRJNA758770 28664 247 0.896552 2.21448344 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 171 1.91e-50   NR MBL7648231.1 2030809 g28538 i0 100 2.98785425101215 82 0 99.6 0 247 2 170 251 MBL7648231.1 NAD-dependent epimerase/dehydratase family protein [Candidatus Hydrogenedentota bacterium] diamond 738 171 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29673777 29673777 PRJNA758770_S_NODE_29290_length_246_cov_0.901734_g29164_i0 PRJNA758770 29290 246 0.901734 2.21826564 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 75.9 8.22e-14   NR MCC6698808.1 2030809 g29164 i0 44.3 0.963414634146341 79 43 95.1 1 12 245 394 472 MCC6698808.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 237 75.9 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
32107840 32107840 PRJNA758770_S_NODE_30778_length_244_cov_0.912281_g30652_i0 PRJNA758770 30778 244 0.912281 2.22596564 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 125 3.1699999999999998e-31   NR MBI2432670.1 2030809 g30652 i0 65.8 0.971311475409836 79 27 97.1 0 237 1 58 136 MBI2432670.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 237 125 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
32551133 32551133 PRJNA758770_S_NODE_25979_length_250_cov_0.881356_g25853_i0 PRJNA758770 25979 250 0.881356 2.20339 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 144 7.13e-42   NR MCC6152152.1 2030809 g25853 i0 92.8 1.992 83 6 99.6 0 249 1 57 139 MCC6152152.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 498 144 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
32897090 32897090 PRJNA758770_S_NODE_27100_length_249_cov_0.886364_g26974_i0 PRJNA758770 27100 249 0.886364 2.20704636 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 137 1.51e-36   NR MCC6697136.1 2030809 g26974 i0 73.5 1 83 22 100 0 249 1 167 249 MCC6697136.1 PQQ-binding-like beta-propeller repeat protein [Candidatus Hydrogenedentota bacterium] diamond 249 137 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;