RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where bioproject = "PRJNA758770", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 6 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 6 ✖

bioproject 1

  • PRJNA758770 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26704691 26704691 PRJNA758770_S_NODE_25441_length_251_cov_0.876404_g25315_i0 PRJNA758770 25441 251 0.876404 2.19977404 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 83.6 1.2e-18   NR MCB5255643.1 2030808 g25315 i0 95 0.47808764940239 40 2 47.8 0 250 131 69 108 MCB5255643.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 120 83.6 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
27210927 27210927 PRJNA758770_S_NODE_19082_length_277_cov_0.965686_g18956_i0 PRJNA758770 19082 277 0.965686 2.67495022 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 180 2.1699999999999993e-52   NR MCB5254926.1 2030808 g18956 i0 97.8 0.996389891696751 92 2 99.6 0 1 276 304 395 MCB5254926.1 ISLre2 family transposase [Candidatus Cloacimonadota bacterium] diamond 276 180 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
27969064 27969064 PRJNA758770_S_NODE_30165_length_245_cov_0.906977_g30039_i0 PRJNA758770 30165 245 0.906977 2.22209365 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 140 7.099999999999999e-38   NR MCB5279286.1 2030808 g30039 i0 87.7 0.991836734693878 81 10 99.2 0 243 1 51 131 MCB5279286.1 phage major capsid protein [Candidatus Cloacimonadota bacterium] diamond 243 140 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
30526965 30526965 PRJNA758770_S_NODE_9933_length_353_cov_1.489286_g9807_i0 PRJNA758770 9933 353 1.489286 5.25717958 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 115 2.25e-27   NR MCB5254926.1 2030808 g9807 i0 100 0.501416430594901 59 0 50.1 0 177 1 1 59 MCB5254926.1 ISLre2 family transposase [Candidatus Cloacimonadota bacterium] diamond 177 115 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
30684886 30684886 PRJNA758770_S_NODE_28853_length_246_cov_1.803468_g28727_i0 PRJNA758770 28853 246 1.803468 4.43653128 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 54.7 2.44e-6   NR MCB5255645.1 2030808 g28727 i0 100 0.317073170731707 26 0 31.7 0 169 246 579 604 MCB5255645.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 78 54.7 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
31221905 31221905 PRJNA758770_S_NODE_27975_length_248_cov_0.868571_g27849_i0 PRJNA758770 27975 248 0.868571 2.15405608 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 141 2.58e-40   NR MDD2718673.1 2030808 g27849 i0 84.1 0.991935483870968 82 13 99.2 0 3 248 121 202 MDD2718673.1 50S ribosomal protein L4 [Candidatus Cloacimonadota bacterium] diamond 246 141 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;