RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA758398" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA758398 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14768735 14768735 PRJNA758398_S_NODE_35712_length_180_cov_1.167939_g35571_i0 PRJNA758398 35712 180 1.167939 2.1022902 root 1 Root_unresolved Root_unresolved 91.3 1.26e-19   NR NLE40215.1 1932692 g35571 i0 76.3 11.7666666666667 59 14 98.3 0 178 2 565 623 NLE40215.1 ATP-dependent chaperone ClpB [Lentisphaerota bacterium] diamond 2118 91.7 0.995637949836423 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
30884263 30884263 PRJNA758398_S_NODE_39894_length_171_cov_1.254098_g39753_i0 PRJNA758398 39894 171 1.254098 2.14450758 Bacteria 2 Bacteria Bacteria 59.7 1.17e-8   NR OGV21019.1 1798570 g39753 i0 71.4 3.68421052631579 42 12 73.7 0 169 44 174 215 OGV21019.1 MAG: oxidoreductase [Lentisphaerae bacterium GWF2_38_69] diamond 630 60.1 0.993344425956739 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerae bacterium GWF2_38_69

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;