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contig_metadata

21 rows where bioproject = "PRJNA758398" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 21 ✖

bioproject 1

  • PRJNA758398 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1204283 1204283 PRJNA758398_S_NODE_22241_length_218_cov_1.171598_g22100_i0 PRJNA758398 22241 218 1.171598 2.55408364 Haloplanus 376170 Archaea Archaea 80.5 8.84e-11   NTclustered gi|1785199060|gb|CP034345.1| 1816183 g22100 i0 100 44.5733944954128 43 0 20 0 3 45 768248 768290 Haloplanus rallus strain MBLA0036 chromosome, complete genome blastn 9717 80.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloplanus Haloplanus rallus
4568110 4568110 PRJNA758398_S_NODE_2944_length_549_cov_3.598000_g2806_i0 PRJNA758398 2944 549 3.598 19.75302 uncultured Methanoregula sp. 1005933 Archaea Archaea 835 0   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g2806 i0 97.925 235.868852459016 482 10 88 0 1 482 3117088 3117569 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 129492 835 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
5843307 5843307 PRJNA758398_S_NODE_33525_length_185_cov_1.125000_g33384_i0 PRJNA758398 33525 185 1.125 2.08125 Halobaculum lipolyticum 3032001 Archaea Archaea 54.7 0.004   NTclustered gi|2511738008|gb|CP126154.1| 3032001 g33384 i0 96.97 0.178378378378378 33 0 18 1 71 103 1995108 1995139 Halobaculum lipolyticum strain DT31 chromosome, complete genome blastn 33 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobaculum Halobaculum lipolyticum
9668236 9668236 PRJNA758398_S_NODE_28648_length_198_cov_0.865772_g28507_i0 PRJNA758398 28648 198 0.865772 1.71422856 root 1 Root_unresolved Root_unresolved 55.5 3.07e-7   NR TMS40837.1 2164 g28507 i0 78.8 3.56060606060606 33 7 50 0 63 161 167 199 TMS40837.1 MAG: SHOCT domain-containing protein [Methanobacterium sp.] diamond 705 55.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
12219322 12219322 PRJNA758398_S_NODE_25010_length_208_cov_2.566038_g24869_i0 PRJNA758398 25010 208 2.566038 5.33735904 Methanobrevibacter sp. YE315 1609968 Archaea Archaea 52.8 0.018   NTclustered gi|985614202|gb|CP010834.1| 1609968 g24869 i0 100 0.134615384615385 28 0 13 0 28 55 847019 846992 Methanobrevibacter sp. YE315, complete genome blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. YE315
16042314 16042314 PRJNA758398_S_NODE_23773_length_212_cov_2.190184_g23632_i0 PRJNA758398 23773 212 2.190184 4.64319008 Methanobacteriota archaeon 2026739 Archaea Archaea 84.7 5.01e-18   NR RYE97637.1 2026739 g23632 i0 57.4 2.85849056603774 68 26 96.2 1 2 205 169 233 RYE97637.1 MAG: C1 family peptidase, partial [Methanobacteriota archaeon] diamond 606 84.7 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
18591350 18591350 PRJNA758398_S_NODE_21775_length_220_cov_0.894737_g21634_i0 PRJNA758398 21775 220 0.894737 1.9684214 Methanobrevibacter 2172 Archaea Archaea 119 4.07e-29   NR WP_295614768.1 253161 g21634 i0 79.2 1.96363636363636 72 15 98.2 0 3 218 21 92 WP_295614768.1 GTP-binding protein [uncultured Methanobrevibacter sp.] diamond 432 120 0.991666666666667 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
19866902 19866902 PRJNA758398_S_NODE_54496_length_161_cov_0.910714_g54355_i0 PRJNA758398 54496 161 0.910714 1.46624954 Methanobacteriaceae archaeon 2099680 Archaea Archaea 110 3.8200000000000005e-27   NR NYB25844.1 2099680 g54355 i0 96.2 0.987577639751553 53 2 98.8 0 2 160 184 236 NYB25844.1 tryptophan synthase subunit beta [Methanobacteriaceae archaeon] diamond 159 110 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
24966331 24966331 PRJNA758398_S_NODE_34020_length_184_cov_1.133333_g33879_i0 PRJNA758398 34020 184 1.133333 2.08533272 Pyrococcus sp. NA2 342949 Archaea Archaea 52.8 0.016   NTclustered gi|331033106|gb|CP002670.1| 342949 g33879 i0 100 0.152173913043478 28 0 15 0 144 171 1081645 1081672 Pyrococcus sp. NA2, complete genome blastn 28 52.8 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus sp. NA2
27526945 27526945 PRJNA758398_S_NODE_17803_length_238_cov_1.349206_g17662_i0 PRJNA758398 17803 238 1.349206 3.21111028 Candidatus Poseidonia alphae 1915863 Archaea Archaea 59.7 2.48e-8   NR MDA7464142.1 1915863 g17662 i0 42.6 2.31932773109244 68 33 80.7 3 236 45 201 266 MDA7464142.1 lipase family protein [Candidatus Poseidonia alphae] diamond 552 59.7 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Poseidoniaceae Candidatus Poseidonia Candidatus Poseidonia alphae
27621905 27621905 PRJNA758398_S_NODE_7964_length_341_cov_1.571918_g7823_i0 PRJNA758398 7964 341 1.571918 5.36024038 Methanomicrobiales archaeon 2184052 Archaea Archaea 58.5 2.95e-7   NR MEI7648635.1 2184052 g7823 i0 38 0.809384164222874 92 54 80.1 2 340 68 112 201 MEI7648635.1 kelch repeat-containing protein [Methanomicrobiales archaeon] diamond 276 58.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon
28010595 28010595 PRJNA758398_S_NODE_40525_length_170_cov_1.140496_g40384_i0 PRJNA758398 40525 170 1.140496 1.9388432 root 1 Root_unresolved Root_unresolved 42.4 0.0194   NR RJU80011.1 2163009 g40384 i0 52.3 2.91176470588235 44 17 77.6 1 38 169 122 161 RJU80011.1 MAG: hypothetical protein DWC09_08350 [Candidatus Poseidoniales archaeon] diamond 495 42.4 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
28789846 28789846 PRJNA758398_S_NODE_36247_length_179_cov_1.030769_g36106_i0 PRJNA758398 36247 179 1.030769 1.84507651 Thermoplasmata archaeon 1906666 Archaea Archaea 86.3 7.27e-18   NR MEM0354068.1 1906666 g36106 i0 55.9 1.94413407821229 59 26 98.9 0 2 178 198 256 MEM0354068.1 hypothetical protein [Thermoplasmata archaeon] diamond 348 86.3 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30021597 30021597 PRJNA758398_S_NODE_31931_length_189_cov_1.092857_g31790_i0 PRJNA758398 31931 189 1.092857 2.06549973 Methanosphaera sp. 2666342 Archaea Archaea 65.5 1.73e-10   NR MEE3419037.1 2666342 g31790 i0 48.3 0.952380952380952 60 29 92.1 1 176 3 924 983 MEE3419037.1 hypothetical protein [Methanosphaera sp.] diamond 180 65.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp.
30306329 30306329 PRJNA758398_S_NODE_5692_length_399_cov_1.428571_g5551_i0 PRJNA758398 5692 399 1.428571 5.69999829 Methanobacteriota archaeon 2026739 Archaea Archaea 66.2 1.27e-9   NR MDQ1274818.1 2026739 g5551 i0 58.3 1.96992481203008 48 20 36.1 0 146 3 120 167 MDQ1274818.1 hypothetical protein [Methanobacteriota archaeon] diamond 786 66.2 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31221886 31221886 PRJNA758398_S_NODE_48975_length_164_cov_0.886957_g48834_i0 PRJNA758398 48975 164 0.886957 1.45460948 Methanobacterium 2160 Archaea Archaea 83.2 1.54e-18   NR WP_048082777.1 2160 g48834 i0 69.8 6.84146341463415 53 16 97 0 163 5 79 131 WP_048082777.1 MULTISPECIES: nucleoside deaminase [Methanobacterium] diamond 1122 83.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium  
31506979 31506979 PRJNA758398_S_NODE_27536_length_201_cov_1.006579_g27395_i0 PRJNA758398 27536 201 1.006579 2.02322379 Halobacteriales archaeon 1904752 Archaea Archaea 55.8 3.43e-7   NR MFT4890214.1 1904752 g27395 i0 48.1 5.25373134328358 52 27 77.6 0 7 162 148 199 MFT4890214.1 uridine kinase [Halobacteriales archaeon] diamond 1056 55.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon
31507015 31507015 PRJNA758398_S_NODE_49576_length_163_cov_0.894737_g49435_i0 PRJNA758398 49576 163 0.894737 1.45842131 Methanosarcinales archaeon 2250255 Archaea Archaea 114 4.74e-29   NR RYE84210.1 2250255 g49435 i0 100 0.975460122699387 53 0 97.5 0 3 161 89 141 RYE84210.1 MAG: ATP-binding cassette domain-containing protein [Methanosarcinales archaeon] diamond 159 114 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
31633213 31633213 PRJNA758398_S_NODE_27636_length_200_cov_2.092715_g27495_i0 PRJNA758398 27636 200 2.092715 4.18543 uncultured Methanoregula sp. 1005933 Archaea Archaea 42.7 0.021   NR WP_320161582.1 1005933 g27495 i0 41.5 0.975 65 36 96 2 1 192 271 334 WP_320161582.1 hypothetical protein [uncultured Methanoregula sp.] diamond 195 42.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
32275998 32275998 PRJNA758398_S_NODE_17838_length_238_cov_1.079365_g17697_i0 PRJNA758398 17838 238 1.079365 2.5688887 root 1 Root_unresolved Root_unresolved 66.2 1.82e-10   NR MEM0354167.1 1906666 g17697 i0 40 2.73529411764706 75 40 88.2 2 2 211 170 244 MEM0354167.1 hypothetical protein [Thermoplasmata archaeon] diamond 651 66.6 0.993993993993994 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
32875402 32875402 PRJNA758398_S_NODE_27140_length_202_cov_1.111111_g26999_i0 PRJNA758398 27140 202 1.111111 2.24444422 Methanobacterium 2160 Archaea Archaea 82 7.47e-17   NR WP_243687863.1 2162 g26999 i0 58.8 9.08910891089109 68 27 99.5 1 2 202 184 251 WP_243687863.1 AIM24 family protein [Methanobacterium formicicum] diamond 1836 82 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium formicicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;