RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

24 rows where bioproject = "PRJNA758398", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 24 ✖

tax_kingdom 1

  • Metazoa · 24 ✖

tax_clade 1

bioproject 1

  • PRJNA758398 · 24 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24966043 24966043 PRJNA758398_S_NODE_1100_length_842_cov_19.008827_g1004_i0 PRJNA758398 1100 842 19.008827 160.05432334 Anneissia japonica 1529436 Echinodermata other_Eukaryota 289 1.16e-94   NR XP_033118288.1 1529436 g1004 i0 60.4 3.36698337292162 235 93 83.7 0 80 784 9 243 XP_033118288.1 60S ribosomal protein L7-like isoform X2 [Anneissia japonica] diamond 2835 289 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
27116026 27116026 PRJNA758398_S_NODE_18762_length_233_cov_1.108696_g18621_i0 PRJNA758398 18762 233 1.108696 2.58326168 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 72.4 8.68e-13   NR PIK55910.1 307972 g18621 i0 50 1.85407725321888 70 34 90.1 1 2 211 168 236 PIK55910.1 hypothetical protein BSL78_07180 [Apostichopus japonicus] diamond 432 72.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
27179283 27179283 PRJNA758398_S_NODE_35322_length_181_cov_1.128788_g35181_i0 PRJNA758398 35322 181 1.128788 2.04310628 Acanthaster planci 133434 Echinodermata other_Eukaryota 71.2 1.29e-12   NR XP_022105173.1 133434 g35181 i0 57.1 2.98342541436464 63 24 99.4 1 1 180 64 126 XP_022105173.1 4-hydroxyphenylpyruvate dioxygenase-like [Acanthaster planci] diamond 540 71.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
27274348 27274348 PRJNA758398_S_NODE_33143_length_186_cov_1.116788_g33002_i0 PRJNA758398 33143 186 1.116788 2.07722568 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 68.6 1.41e-11   NR PIK50489.1 307972 g33002 i0 49.2 2.91935483870968 61 31 98.4 0 1 183 469 529 PIK50489.1 ATP-binding cassette transporter subfamily A [Apostichopus japonicus] diamond 543 68.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
27442332 27442332 PRJNA758398_S_NODE_10643_length_297_cov_2.737903_g10502_i0 PRJNA758398 10643 297 2.737903 8.13157191 Metazoa 33208 Echinodermata other_Eukaryota 102 1.0300000000000001e-22   NR XP_041460305.1 7654 g10502 i0 49.5 3.94949494949495 97 46 98 2 292 2 236 329 XP_041460305.1 protein DD3-3-like [Lytechinus variegatus] diamond 1173 102 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
27568212 27568212 PRJNA758398_S_NODE_3144_length_533_cov_2.876033_g3005_i0 PRJNA758398 3144 533 2.876033 15.32925589 Metazoa 33208 Echinodermata other_Eukaryota 102 1.38e-24   NR XP_038058372.1 46514 g3005 i0 66.7 4.23264540337711 72 24 40.5 0 497 282 29 100 XP_038058372.1 protein transport protein Sec61 subunit gamma [Patiria miniata] diamond 2256 103 0.990291262135922 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
28484038 28484038 PRJNA758398_S_NODE_9926_length_307_cov_2.364341_g9785_i0 PRJNA758398 9926 307 2.364341 7.25852687 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 73.9 1.49e-13   NR XP_041453913.1 7654 g9785 i0 46.5 9.87947882736156 99 45 96.7 2 297 1 85 175 XP_041453913.1 60S ribosomal protein L13-like [Lytechinus variegatus] diamond 3033 73.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
28505785 28505785 PRJNA758398_S_NODE_21227_length_222_cov_1.179191_g21086_i0 PRJNA758398 21227 222 1.179191 2.61780402 Anneissia japonica 1529436 Echinodermata other_Eukaryota 70.1 7.83e-13   NR XP_033122840.1 1529436 g21086 i0 44.4 1.93243243243243 72 40 97.3 0 220 5 9 80 XP_033122840.1 adenine phosphoribosyltransferase-like [Anneissia japonica] diamond 429 70.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
28505795 28505795 PRJNA758398_S_NODE_24687_length_209_cov_2.831250_g24546_i0 PRJNA758398 24687 209 2.83125 5.9173125 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 50.4 1.32e-5   NR PIK33823.1 307972 g24546 i0 40 1.00478468899522 70 40 97.6 1 206 3 71 140 PIK33823.1 putative calbindin-32-like isoform X6, partial [Apostichopus japonicus] diamond 210 50.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
29074326 29074326 PRJNA758398_S_NODE_23848_length_212_cov_1.564417_g23707_i0 PRJNA758398 23848 212 1.564417 3.31656404 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 51.2 2.6e-5   NR KAJ8021435.1 206669 g23707 i0 62.5 0.452830188679245 32 12 45.3 0 2 97 2985 3016 KAJ8021435.1 Antistasin [Holothuria leucospilota] diamond 96 51.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
29169011 29169011 PRJNA758398_S_NODE_26409_length_204_cov_1.296774_g26268_i0 PRJNA758398 26409 204 1.296774 2.64541896 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 48.5 2.06e-4   NR XP_030834161.1 7668 g26268 i0 51.2 4.10294117647059 43 20 61.8 1 56 181 3958 4000 XP_030834161.1 uncharacterized protein LOC764957 [Strongylocentrotus purpuratus] diamond 837 48.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
29515996 29515996 PRJNA758398_S_NODE_43210_length_167_cov_0.864407_g43069_i0 PRJNA758398 43210 167 0.864407 1.44355969 Diadema antillarum 105358 Echinodermata other_Eukaryota 47.8 2.28e-4   NR XP_071486161.1 105358 g43069 i0 37.7 2.06586826347305 61 31 97 1 6 167 804 864 XP_071486161.1 uncharacterized protein [Diadema antillarum] diamond 345 47.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
29999777 29999777 PRJNA758398_S_NODE_48331_length_164_cov_0.886957_g48190_i0 PRJNA758398 48331 164 0.886957 1.45460948 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 93.6 6.89e-23   NR AAB48832.1 7660 g48190 i0 83.3 646.024390243902 54 9 98.8 0 2 163 65 118 AAB48832.1 cleavage stage histone H2B [Psammechinus miliaris] diamond 105948 93.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Parechinidae Psammechinus Psammechinus miliaris
30179324 30179324 PRJNA758398_S_NODE_42472_length_167_cov_0.864407_g42331_i0 PRJNA758398 42472 167 0.864407 1.44355969 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 44.3 0.00388   NR XP_030854404.1 7668 g42331 i0 45.2 0.754491017964072 42 20 70.1 1 17 133 560 601 XP_030854404.1 papilin isoform X1 [Strongylocentrotus purpuratus] diamond 126 44.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
30210806 30210806 PRJNA758398_S_NODE_29932_length_194_cov_1.406897_g29791_i0 PRJNA758398 29932 194 1.406897 2.72938018 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 42 0.0373   NR XP_003723284.2 7668 g29791 i0 36.2 0.72680412371134 47 30 72.7 0 156 16 363 409 XP_003723284.2 uncharacterized protein LOC100893670 [Strongylocentrotus purpuratus] diamond 141 42 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
30558365 30558365 PRJNA758398_S_NODE_31813_length_189_cov_1.457143_g31672_i0 PRJNA758398 31813 189 1.457143 2.75400027 Anneissia japonica 1529436 Echinodermata other_Eukaryota 42.4 0.0251   NR XP_033127688.1 1529436 g31672 i0 40.9 0.698412698412698 44 23 69.8 1 160 29 585 625 XP_033127688.1 mediator of RNA polymerase II transcription subunit 24-like isoform X4 [Anneissia japonica] diamond 132 42.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
31199807 31199807 PRJNA758398_S_NODE_48955_length_164_cov_0.886957_g48814_i0 PRJNA758398 48955 164 0.886957 1.45460948 Echinodermata 7586 Echinodermata other_Eukaryota 80.5 6.24e-16   NR XP_038056551.1 46514 g48814 i0 57.4 5.92682926829268 54 23 98.8 0 2 163 478 531 XP_038056551.1 paxillin-like [Patiria miniata] diamond 972 81.3 0.990159901599016 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
31516724 31516724 PRJNA758398_S_NODE_50856_length_163_cov_0.894737_g50715_i0 PRJNA758398 50856 163 0.894737 1.45842131 Opisthokonta 33154 Echinodermata other_Eukaryota 50.1 3.15e-5   NR NP_001020382.1 7668 g50715 i0 42 2.87116564417178 50 28 92 1 152 3 324 372 NP_001020382.1 eukaryotic translation elongation factor 1 gamma [Strongylocentrotus purpuratus] diamond 468 50.4 0.994047619047619 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
32012926 32012926 PRJNA758398_S_NODE_33358_length_185_cov_1.500000_g33217_i0 PRJNA758398 33358 185 1.5 2.775 Acanthaster planci 133434 Echinodermata other_Eukaryota 67 3.19e-11   NR XP_022107871.1 133434 g33217 i0 63.3 1.58918918918919 49 16 79.5 1 183 37 251 297 XP_022107871.1 uncharacterized protein LOC110988544 isoform X1 [Acanthaster planci] diamond 294 67 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
32180970 32180970 PRJNA758398_S_NODE_40038_length_171_cov_1.163934_g39897_i0 PRJNA758398 40038 171 1.163934 1.99032714 Metazoa 33208 Echinodermata other_Eukaryota 52.4 5.82e-6   NR AAB82088.1 7654 g39897 i0 53.3 4.3859649122807 45 20 78.9 1 4 138 162 205 AAB82088.1 notch homolog [Lytechinus variegatus] diamond 750 52.8 0.992424242424242 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
32392567 32392567 PRJNA758398_S_NODE_23059_length_215_cov_1.228916_g22918_i0 PRJNA758398 23059 215 1.228916 2.6421694 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 71.2 7.12e-13   NR XP_041468432.1 7654 g22918 i0 50 0.948837209302326 68 33 94.9 1 213 10 157 223 XP_041468432.1 viral IAP-associated factor homolog [Lytechinus variegatus] diamond 204 71.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
32592163 32592163 PRJNA758398_S_NODE_43539_length_166_cov_1.743590_g43398_i0 PRJNA758398 43539 166 1.74359 2.8943594 Echinoidea 7625 Echinodermata other_Eukaryota 60.1 1.01e-8   NR XP_041459912.1 7654 g43398 i0 81.8 1.19277108433735 33 6 59.6 0 8 106 335 367 XP_041459912.1 transketolase-like protein 2 isoform X2 [Lytechinus variegatus] diamond 198 60.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
32834220 32834220 PRJNA758398_S_NODE_6200_length_383_cov_1.571856_g6059_i0 PRJNA758398 6200 383 1.571856 6.02020848 Anneissia japonica 1529436 Echinodermata other_Eukaryota 138 6e-38   NR XP_033118288.1 1529436 g6059 i0 69.2 3.56396866840731 91 28 71.3 0 274 2 65 155 XP_033118288.1 60S ribosomal protein L7-like isoform X2 [Anneissia japonica] diamond 1365 138 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
32865661 32865661 PRJNA758398_S_NODE_11820_length_284_cov_0.868085_g11679_i0 PRJNA758398 11820 284 0.868085 2.4653614 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 53.5 7.25e-6   NR XP_003729468.1 7668 g11679 i0 38.5 2.71478873239437 65 37 66.5 2 282 94 136 199 XP_003729468.1 DCN1-like protein 1 [Strongylocentrotus purpuratus] diamond 771 53.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;