RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA758398", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 4 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 4 ✖

bioproject 1

  • PRJNA758398 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27716813 27716813 PRJNA758398_S_NODE_10364_length_301_cov_1.821429_g10223_i0 PRJNA758398 10364 301 1.821429 5.48250129 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 42.4 0.0125   NR MCA9414572.1 2035772 g10223 i0 38.3 0.46843853820598 47 29 46.8 0 3 143 8 54 MCA9414572.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 141 42.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27937571 27937571 PRJNA758398_S_NODE_34125_length_183_cov_2.186567_g33984_i0 PRJNA758398 34125 183 2.186567 4.00141761 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 71.6 1.32e-14   NR MSR77670.1 2035772 g33984 i0 46.7 3.01639344262295 60 30 98.4 1 180 1 11 68 MSR77670.1 glutaredoxin 3 [Candidatus Omnitrophota bacterium] diamond 552 71.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30716469 30716469 PRJNA758398_S_NODE_54274_length_161_cov_0.910714_g54133_i0 PRJNA758398 54274 161 0.910714 1.46624954 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 45.8 6.23e-4   NR MBI3313914.1 2035772 g54133 i0 47.9 0.894409937888199 48 21 89.4 2 1 144 89 132 MBI3313914.1 rhodanese-like domain-containing protein [Candidatus Omnitrophota bacterium] diamond 144 45.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31285252 31285252 PRJNA758398_S_NODE_29415_length_195_cov_2.445205_g29274_i0 PRJNA758398 29415 195 2.445205 4.76814975 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 62 2.9e-9   NR MFA5039993.1 2035772 g29274 i0 45.9 0.938461538461538 61 30 93.8 2 184 2 151 208 MFA5039993.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 183 62 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;