RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA758398", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA758398 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27084680 27084680 PRJNA758398_S_NODE_23542_length_213_cov_1.554878_g23401_i0 PRJNA758398 23542 213 1.554878 3.31189014 Chitinispirillaceae bacterium 2813024 Bacteria Bacteria 81.6 4.83e-16   NR MFP4014960.1 2813024 g23401 i0 53.7 1.87323943661972 67 31 94.4 0 203 3 192 258 MFP4014960.1 insulinase family protein [Chitinispirillaceae bacterium] diamond 399 81.6 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinispirillia Chitinispirillales Chitinispirillaceae   Chitinispirillaceae bacterium
30590098 30590098 PRJNA758398_S_NODE_36553_length_178_cov_1.186047_g36412_i0 PRJNA758398 36553 178 1.186047 2.11116366 Fibrobacteria bacterium 2725311 Bacteria Bacteria 45.1 0.00242   NR MCD6023281.1 2725311 g36412 i0 42.4 1.93820224719101 59 32 96.1 1 4 174 402 460 MCD6023281.1 hypothetical protein [Fibrobacteria bacterium] diamond 345 45.1 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;