RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA758398", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA758398 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27179305 27179305 PRJNA758398_S_NODE_502_length_1139_cov_2.759633_g449_i0 PRJNA758398 502 1139 2.759633 31.43221987 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 52.8 0.00246   NR HSX08275.1 2973664 g449 i0 31.4 0.460930640913082 175 95 39.8 6 783 331 266 439 HSX08275.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 525 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
30052918 30052918 PRJNA758398_S_NODE_2631_length_575_cov_3.414449_g2496_i0 PRJNA758398 2631 575 3.414449 19.63308175 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 48.1 0.011   NR MBQ3293926.1 2026720 g2496 i0 53.4 0.302608695652174 58 20 26.6 2 155 3 836 893 MBQ3293926.1 cadherin-like beta sandwich domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 174 48.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;