RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA758398", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 6 ✖

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA758398 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27179295 27179295 PRJNA758398_S_NODE_44482_length_166_cov_0.871795_g44341_i0 PRJNA758398 44482 166 0.871795 1.4471797 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 72.4 4.4e-13   NR MBX9808909.1 2044595 g44341 i0 70.7 0.740963855421687 41 12 74.1 0 158 36 440 480 MBX9808909.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 123 72.4 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27842612 27842612 PRJNA758398_S_NODE_44344_length_166_cov_0.871795_g44203_i0 PRJNA758398 44344 166 0.871795 1.4471797 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 47.4 1.1e-4   NR NRH20827.1 2044595 g44203 i0 63.6 0.596385542168675 33 12 59.6 0 63 161 55 87 NRH20827.1 DUF1761 domain-containing protein [Candidatus Altimarinota bacterium] diamond 99 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30432601 30432601 PRJNA758398_S_NODE_46253_length_165_cov_0.879310_g46112_i0 PRJNA758398 46253 165 0.87931 1.4508615 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 97.8 5.34e-22   NR MBX9809011.1 2044595 g46112 i0 81.8 1 55 10 100 0 1 165 325 379 MBX9809011.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 165 97.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30442071 30442071 PRJNA758398_S_NODE_14713_length_258_cov_1.220096_g14572_i0 PRJNA758398 14713 258 1.220096 3.14784768 Bacteria 2 Bacteria Bacteria 46.6 0.00154   NR MFA5352407.1 2044595 g14572 i0 40.8 2.27906976744186 49 29 57 0 105 251 54 102 MFA5352407.1 CAP domain-containing protein [Candidatus Altimarinota bacterium] diamond 588 47 0.991489361702128 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31728027 31728027 PRJNA758398_S_NODE_10217_length_303_cov_1.720472_g10076_i0 PRJNA758398 10217 303 1.720472 5.21303016 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 94.4 6.820000000000001e-21   NR MBX9809727.1 2044595 g10076 i0 67 0.930693069306931 94 30 92.1 1 6 284 13 106 MBX9809727.1 CAP domain-containing protein [Candidatus Altimarinota bacterium] diamond 282 94.4 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31791200 31791200 PRJNA758398_S_NODE_12957_length_273_cov_1.138393_g12816_i0 PRJNA758398 12957 273 1.138393 3.10781289 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 148 3.66e-39   NR MBC7498268.1 2044595 g12816 i0 91.2 1 91 8 100 0 1 273 237 327 MBC7498268.1 S-layer homology domain-containing protein [Candidatus Altimarinota bacterium] diamond 273 148 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;