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contig_metadata

10 rows where bioproject = "PRJNA758398", tax_clade = "Amoebozoa" and tax_phylum = "Tubulinea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Tubulinea · 10 ✖

tax_clade 1

  • Amoebozoa · 10 ✖

bioproject 1

  • PRJNA758398 · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2015673 2015673 PRJNA758398_S_NODE_22182_length_218_cov_1.319527_g22041_i0 PRJNA758398 22182 218 1.319527 2.87656886 Amoeba proteus 5775 Tubulinea other_Eukaryota 130 1.5399999999999999e-34   NR AAP88974.1 5775 g22041 i0 86.1 0.990825688073395 72 10 99.1 0 218 3 196 267 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 216 130 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
3291042 3291042 PRJNA758398_S_NODE_33263_length_185_cov_2.132353_g33122_i0 PRJNA758398 33263 185 2.132353 3.94485305 Copromyxa protea 931554 Tubulinea other_Eukaryota 219 1.4699999999999996e-52   NTclustered gi|508737347|dbj|AB766053.1| 931554 g33122 i0 92.715 0.816216216216216 151 11 82 0 35 185 523 373 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 151 219 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
3291079 3291079 PRJNA758398_S_NODE_36603_length_178_cov_1.186047_g36462_i0 PRJNA758398 36603 178 1.186047 2.11116366 Spumochlamys perforata 675831 Tubulinea other_Eukaryota 243 8.33e-60   NTclustered gi|259595680|gb|FJ705344.1| 675831 g36462 i0 92.353 99.438202247191 170 13 96 0 9 178 653 484 Spumochlamys perforata actin gene, partial cds blastn 17700 243 1 Eukaryota Amoebozoa   Tubulinea Corycida   Microchlamyiidae Spumochlamys Spumochlamys perforata
9668276 9668276 PRJNA758398_S_NODE_31888_length_189_cov_1.092857_g31747_i0 PRJNA758398 31888 189 1.092857 2.06549973 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 178 2.5599999999999993e-40   NTclustered gi|345452566|gb|JF694301.1| 1078836 g31747 i0 83.957 50.6507936507937 187 28 98 2 3 188 505 320 Cryptodifflugia operculata clone 5 actin gene, partial cds blastn 9573 178 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
17317855 17317855 PRJNA758398_S_NODE_21614_length_220_cov_1.783626_g21473_i0 PRJNA758398 21614 220 1.783626 3.9239772 Copromyxa protea 931554 Tubulinea other_Eukaryota 303 4.87e-78   NTclustered gi|508737347|dbj|AB766053.1| 931554 g21473 i0 91.818 5.73636363636364 220 14 99 3 3 220 1011 794 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 1262 303 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
17318130 17318130 PRJNA758398_S_NODE_42794_length_167_cov_0.864407_g42653_i0 PRJNA758398 42794 167 0.864407 1.44355969 Copromyxa protea 931554 Tubulinea other_Eukaryota 259 7.69e-65   NTclustered gi|508737347|dbj|AB766053.1| 931554 g42653 i0 94.611 28.1916167664671 167 9 100 0 1 167 310 144 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 4708 259 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
26989524 26989524 PRJNA758398_S_NODE_21762_length_220_cov_0.894737_g21621_i0 PRJNA758398 21762 220 0.894737 1.9684214 Lesquereusia modesta 1260108 Tubulinea other_Eukaryota 114 3.4400000000000003e-29   NR AFX73094.1 1260108 g21621 i0 71.2 0.995454545454545 73 21 99.5 0 220 2 90 162 AFX73094.1 elongation factor 2 alpha, partial [Lesquereusia modesta] diamond 219 114 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Lesquereusiidae Lesquereusia Lesquereusia modesta
28852903 28852903 PRJNA758398_S_NODE_34448_length_183_cov_1.082090_g34307_i0 PRJNA758398 34448 183 1.08209 1.9802247 Copromyxa protea 931554 Tubulinea other_Eukaryota 119 4.3699999999999995e-30   NR BAN33737.1 931554 g34307 i0 95 0.983606557377049 60 3 98.4 0 182 3 363 422 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 180 119 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
29011374 29011374 PRJNA758398_S_NODE_50748_length_163_cov_0.894737_g50607_i0 PRJNA758398 50748 163 0.894737 1.45842131 Amoeba proteus 5775 Tubulinea other_Eukaryota 76.6 1.23e-14   NR AAD37351.1 5775 g50607 i0 72.5 0.938650306748466 51 14 93.9 0 9 161 123 173 AAD37351.1 pepstatin-insensitive carboxyl proteinase 1, partial [Amoeba proteus] diamond 153 76.6 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
31759786 31759786 PRJNA758398_S_NODE_42337_length_167_cov_0.864407_g42196_i0 PRJNA758398 42337 167 0.864407 1.44355969 Amoeba proteus 5775 Tubulinea other_Eukaryota 98.2 2.0600000000000001e-22   NR AAD37351.1 5775 g42196 i0 80 0.988023952095808 55 11 98.8 0 165 1 91 145 AAD37351.1 pepstatin-insensitive carboxyl proteinase 1, partial [Amoeba proteus] diamond 165 98.2 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;