RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA758088" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA758088 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29863397 29863397 PRJNA758088_P_NODE_340131_length_244_cov_0.900585_g333160_i0 PRJNA758088 340131 244 0.900585 2.1974274 Minisyncoccota bacterium 2053589 Bacteria Bacteria 91.3 3.19e-19   NR MBP6975082.1 2053589 g333160 i0 61.1 2.90163934426229 72 28 88.5 0 28 243 483 554 MBP6975082.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 708 91.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30274427 30274427 PRJNA758088_P_NODE_349272_length_243_cov_0.905882_g342301_i0 PRJNA758088 349272 243 0.905882 2.20129326 Minisyncoccota bacterium 2053589 Bacteria Bacteria 53.1 2.26e-6   NR MBP9717439.1 2053589 g342301 i0 67.6 0.827160493827161 34 11 42 0 213 112 119 152 MBP9717439.1 HNH endonuclease [Candidatus Paceibacterota bacterium] diamond 201 53.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31295060 31295060 PRJNA758088_P_NODE_365795_length_241_cov_0.916667_g358824_i0 PRJNA758088 365795 241 0.916667 2.20916747 Bacillati 1783272 Bacteria Bacteria 57.4 2.34e-7   NR MFA6095644.1 2053589 g358824 i0 54.8 4.99170124481328 62 23 77.2 1 239 54 236 292 MFA6095644.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 1203 57.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;