RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA758088", tax_phylum = "Duplornaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Duplornaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA758088 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2014666 2014666 PRJNA758088_P_NODE_60762_length_558_cov_1.746392_g53872_i0 PRJNA758088 60762 558 1.746392 9.74486736 Red mite associated cystovirus 2936548 Viruses Viruses 1031 0   NTclustered gi|2239998157|gb|ON160023.1| 2936548 g53872 i0 100 1 558 0 100 0 1 558 604 1161 Red mite associated cystovirus isolate RMACTV1-S P8, P12, P9, and P5 genes, complete cds blastn 558 1031 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus
9664933 9664933 PRJNA758088_P_NODE_260088_length_262_cov_2.444444_g253117_i0 PRJNA758088 260088 262 2.444444 6.40444328 Red mite associated cystovirus 2936548 Viruses Viruses 484 1.99e-132   NTclustered gi|2239998157|gb|ON160023.1| 2936548 g253117 i0 100 1 262 0 100 0 1 262 1769 1508 Red mite associated cystovirus isolate RMACTV1-S P8, P12, P9, and P5 genes, complete cds blastn 262 484 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus
17317303 17317303 PRJNA758088_P_NODE_82074_length_467_cov_2.002538_g75105_i0 PRJNA758088 82074 467 2.002538 9.35185246 Red mite associated cystovirus 2936548 Viruses Viruses 863 0   NTclustered gi|2239998157|gb|ON160023.1| 2936548 g75105 i0 100 1.91006423982869 467 0 100 0 1 467 467 1 Red mite associated cystovirus isolate RMACTV1-S P8, P12, P9, and P5 genes, complete cds blastn 892 863 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;