RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA758088" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA758088 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2011974 2011974 PRJNA758088_P_NODE_225102_length_284_cov_1.137441_g218131_i0 PRJNA758088 225102 284 1.137441 3.23033244 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 283 8.539999999999999e-72   NTclustered gi|290760486|gb|GQ144689.1| 361427 g218131 i0 85.985 65.6232394366197 264 37 93 0 21 284 1749 2012 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 18637 283 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
2013825 2013825 PRJNA758088_P_NODE_350762_length_243_cov_0.905882_g343791_i0 PRJNA758088 350762 243 0.905882 2.20129326 Rosculus incognitus 2231162 SAR_Eukaryotes SAR_Eukaryotes 420 5.21e-113   NTclustered gi|1402550483|gb|MH488769.1| 2231162 g343791 i0 97.934 7.440329218107 242 5 99 0 1 242 248 489 Rosculus incognitus isolate ATCC 50577 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 1808 420 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus incognitus
4565066 4565066 PRJNA758088_P_NODE_273844_length_254_cov_1.701657_g266873_i0 PRJNA758088 273844 254 1.701657 4.32220878 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 206 1.67e-48   NTclustered gi|1402550488|gb|MH488774.1| 2231170 g266873 i0 83.929 26.5472440944882 224 27 88 8 32 254 1715 1500 Guttulinopsis rogosa isolate FOLDEDA sequence blastn 6743 206 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa
9664864 9664864 PRJNA758088_P_NODE_255448_length_265_cov_1.604167_g248477_i0 PRJNA758088 255448 265 1.604167 4.25104255 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 163 1.07e-35   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g248477 i0 87.857 35.8339622641509 140 15 53 2 126 265 3852 3715 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 9496 163 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
12216002 12216002 PRJNA758088_P_NODE_257510_length_264_cov_1.251309_g250539_i0 PRJNA758088 257510 264 1.251309 3.30345576 Rosculus hawesi 2231161 SAR_Eukaryotes SAR_Eukaryotes 438 1.5799999999999996e-118   NTclustered gi|1402550478|gb|MH488764.1| 2231161 g250539 i0 96.958 9.9280303030303 263 4 99 2 4 264 840 1100 Rosculus hawesi isolate MSUPP161R small subunit ribosomal RNA gene, partial sequence blastn 2621 438 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus hawesi
28095258 28095258 PRJNA758088_P_NODE_298485_length_249_cov_0.875000_g291514_i0 PRJNA758088 298485 249 0.875 2.17875 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0149   NR MES1912058.1 1215613 g291514 i0 34.8 0.831325301204819 69 40 83.1 1 18 224 99 162 MES1912058.1 hypothetical protein [Cercozoa sp. M6MM] diamond 207 43.9 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
31759713 31759713 PRJNA758088_P_NODE_290257_length_250_cov_0.870056_g283286_i0 PRJNA758088 290257 250 0.870056 2.17514 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 65.9 1.66e-10   NR MES1917315.1 1215613 g283286 i0 38.8 0.96 80 48 94.8 1 10 246 136 215 MES1917315.1 hypothetical protein [Cercozoa sp. M6MM] diamond 240 65.9 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;