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contig_metadata

20 rows where bioproject = "PRJNA758088", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 20 ✖

tax_kingdom 1

  • Pseudomonadati · 20 ✖

bioproject 1

  • PRJNA758088 · 20 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7114721 7114721 PRJNA758088_P_NODE_225666_length_284_cov_0.838863_g218695_i0 PRJNA758088 225666 284 0.838863 2.38237092 Myxococcota bacterium 2818507 Bacteria Bacteria 70.5 9.52e-13   NR MEE3328847.1 2818507 g218695 i0 58.1 0.654929577464789 62 25 65.5 1 70 255 56 116 MEE3328847.1 (2Fe-2S)-binding protein [Myxococcota bacterium] diamond 186 70.5 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
27115989 27115989 PRJNA758088_P_NODE_338722_length_244_cov_0.900585_g331751_i0 PRJNA758088 338722 244 0.900585 2.1974274 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 136 1.63e-38   NR MPZ77540.1 2026735 g331751 i0 84.8 1.94262295081967 79 12 97.1 0 6 242 24 102 MPZ77540.1 NADH-quinone oxidoreductase subunit C [Deltaproteobacteria bacterium] diamond 474 136 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27242579 27242579 PRJNA758088_P_NODE_243903_length_272_cov_1.547739_g236932_i0 PRJNA758088 243903 272 1.547739 4.20985008 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 110 5.200000000000001e-28   NR MBI5587846.1 2026735 g236932 i0 60.9 0.959558823529412 87 34 96 0 272 12 91 177 MBI5587846.1 NAD(P)H:quinone oxidoreductase [Deltaproteobacteria bacterium] diamond 261 110 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27400780 27400780 PRJNA758088_P_NODE_350003_length_243_cov_0.905882_g343032_i0 PRJNA758088 350003 243 0.905882 2.20129326 Myxococcales bacterium 2026763 Bacteria Bacteria 42.7 0.0391   NR MBL92312.1 2026763 g343032 i0 40 0.740740740740741 60 33 70.4 1 46 216 179 238 MBL92312.1 hypothetical protein [Myxococcales bacterium] diamond 180 42.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27463931 27463931 PRJNA758088_P_NODE_307443_length_248_cov_0.880000_g300472_i0 PRJNA758088 307443 248 0.88 2.1824 Myxococcota bacterium 2818507 Bacteria Bacteria 50.1 9.93e-5   NR HJN74097.1 2818507 g300472 i0 40.4 0.689516129032258 57 28 69 1 1 171 265 315 HJN74097.1 MopE-related protein [Myxococcota bacterium] diamond 171 50.1 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
28231094 28231094 PRJNA758088_P_NODE_216006_length_290_cov_1.064516_g209035_i0 PRJNA758088 216006 290 1.064516 3.0870964 Pseudomonadati 3379134 Bacteria Bacteria 112 2.02e-27   NR MCA9534367.1 2026763 g209035 i0 55.2 4.90344827586207 96 43 99.3 0 3 290 84 179 MCA9534367.1 methyltransferase domain-containing protein [Myxococcales bacterium] diamond 1422 112 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28695379 28695379 PRJNA758088_P_NODE_299887_length_249_cov_0.875000_g292916_i0 PRJNA758088 299887 249 0.875 2.17875 Sandaracinaceae bacterium 2510337 Bacteria Bacteria 152 3.789999999999999e-42   NR MBK7778861.1 2510337 g292916 i0 93.9 0.987951807228916 82 5 98.8 0 247 2 90 171 MBK7778861.1 tetratricopeptide repeat protein [Sandaracinaceae bacterium] diamond 246 152 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae   Sandaracinaceae bacterium
28799460 28799460 PRJNA758088_P_NODE_189287_length_309_cov_1.050847_g182316_i0 PRJNA758088 189287 309 1.050847 3.24711723 Pseudomonadati 3379134 Bacteria Bacteria 86.7 2.79e-17   NR MBL8606644.1 2026763 g182316 i0 53.3 2.18446601941748 75 34 71.8 1 86 307 330 404 MBL8606644.1 hypothetical protein [Myxococcales bacterium] diamond 675 87.4 0.991990846681922 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29042664 29042664 PRJNA758088_P_NODE_294448_length_250_cov_0.870056_g287477_i0 PRJNA758088 294448 250 0.870056 2.17514 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 44.7 0.00854   NR MBI5642274.1 2026735 g287477 i0 33.3 1.548 66 41 79.2 2 225 28 14 76 MBI5642274.1 diguanylate cyclase [Deltaproteobacteria bacterium] diamond 387 44.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29168989 29168989 PRJNA758088_P_NODE_89729_length_445_cov_1.241935_g82760_i0 PRJNA758088 89729 445 1.241935 5.52661075 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 228 3.11e-69   NR MCP4669207.1 2026735 g82760 i0 77.7 0.997752808988764 148 33 99.8 0 444 1 180 327 MCP4669207.1 molecular chaperone DnaK [Deltaproteobacteria bacterium] diamond 444 228 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30189078 30189078 PRJNA758088_P_NODE_293372_length_250_cov_0.870056_g286401_i0 PRJNA758088 293372 250 0.870056 2.17514 Myxococcia 32015 Bacteria Bacteria 125 4.69e-33   NR MBL9020351.1 2026763 g286401 i0 71.6 2.916 81 23 97.2 0 8 250 231 311 MBL9020351.1 Zn-dependent exopeptidase M28 [Myxococcales bacterium] diamond 729 125 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30401014 30401014 PRJNA758088_P_NODE_263193_length_261_cov_1.015957_g256222_i0 PRJNA758088 263193 261 1.015957 2.65164777 Kofleriaceae bacterium 2212474 Bacteria Bacteria 42.7 0.0313   NR HEY0479080.1 2212474 g256222 i0 35.2 0.816091954022989 71 41 77 2 59 259 11 80 HEY0479080.1 GNAT family N-acetyltransferase [Kofleriaceae bacterium] diamond 213 42.7 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
30558281 30558281 PRJNA758088_P_NODE_155633_length_338_cov_1.452830_g148662_i0 PRJNA758088 155633 338 1.45283 4.9105654 Sandaracinus sp. 2024858 Bacteria Bacteria 73.2 6.27e-13   NR MBJ70584.1 2024858 g148662 i0 38.4 0.994082840236686 112 66 96.7 2 10 336 50 161 MBJ70584.1 hypothetical protein [Sandaracinus sp.] diamond 336 73.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus sp.
30811258 30811258 PRJNA758088_P_NODE_276814_length_253_cov_1.077778_g269843_i0 PRJNA758088 276814 253 1.077778 2.72677834 Myxococcaceae bacterium 2484252 Bacteria Bacteria 44.7 0.00848   NR HYV44386.1 2484252 g269843 i0 37.7 0.723320158102767 61 37 72.3 1 215 33 163 222 HYV44386.1 gliding motility protein [Myxococcaceae bacterium] diamond 183 44.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
30906259 30906259 PRJNA758088_P_NODE_362214_length_241_cov_0.916667_g355243_i0 PRJNA758088 362214 241 0.916667 2.20916747 Polyangiaceae bacterium 2268199 Bacteria Bacteria 77.8 1.13e-14   NR HEY4015300.1 2268199 g355243 i0 50.6 1.00829875518672 81 37 98.3 2 2 238 220 299 HEY4015300.1 hybrid sensor histidine kinase/response regulator [Polyangiaceae bacterium] diamond 243 77.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31696464 31696464 PRJNA758088_P_NODE_365717_length_241_cov_0.916667_g358746_i0 PRJNA758088 365717 241 0.916667 2.20916747 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 119 3.8199999999999995e-30   NR MBP6743313.1 2026735 g358746 i0 85.9 0.970954356846473 78 11 97.1 0 234 1 1 78 MBP6743313.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 234 119 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32139450 32139450 PRJNA758088_P_NODE_313758_length_247_cov_0.885057_g306787_i0 PRJNA758088 313758 247 0.885057 2.18609079 Polyangiaceae bacterium 2268199 Bacteria Bacteria 82 2.43e-16   NR HVJ21548.1 2268199 g306787 i0 50 0.995951417004049 82 41 99.6 0 246 1 87 168 HVJ21548.1 transglutaminase family protein [Polyangiaceae bacterium] diamond 246 82 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32582464 32582464 PRJNA758088_P_NODE_315419_length_247_cov_0.885057_g308448_i0 PRJNA758088 315419 247 0.885057 2.18609079 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 67.8 5.74e-11   NR RLB48654.1 2026735 g308448 i0 42.9 1.90688259109312 77 41 93.5 1 1 231 294 367 RLB48654.1 MAG: hypothetical protein DRJ42_22720 [Deltaproteobacteria bacterium] diamond 471 67.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32644949 32644949 PRJNA758088_P_NODE_246920_length_270_cov_2.076142_g239949_i0 PRJNA758088 246920 270 2.076142 5.6055834 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 52.4 8.59e-6   NR MCP4666834.1 2026735 g239949 i0 89.3 0.311111111111111 28 3 31.1 0 4 87 148 175 MCP4666834.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 84 52.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32906802 32906802 PRJNA758088_P_NODE_341120_length_244_cov_0.900585_g334149_i0 PRJNA758088 341120 244 0.900585 2.1974274 Pseudomonadati 3379134 Bacteria Bacteria 51.6 2.92e-5   NR MFT3765888.1 1971901 g334149 i0 34.7 1.73360655737705 75 43 84.8 1 8 214 140 214 MFT3765888.1 IPT/TIG domain-containing protein [Minicystis sp.] diamond 423 51.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Minicystis Minicystis sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;