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contig_metadata

23 rows where bioproject = "PRJNA758088", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 23 ✖

tax_kingdom 1

  • Pseudomonadati · 23 ✖

bioproject 1

  • PRJNA758088 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2013900 2013900 PRJNA758088_P_NODE_356042_length_242_cov_0.911243_g349071_i0 PRJNA758088 356042 242 0.911243 2.20520806 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 414 2.41e-111   NTclustered gi|31789464|gb|AY281356.1| 171953 g349071 i0 97.521 99.7479338842975 242 6 100 0 1 242 11460 11219 Uncultured Acidobacteria bacterium clone 41b15 genomic sequence blastn 24139 414 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
14764544 14764544 PRJNA758088_P_NODE_201932_length_299_cov_1.792035_g194961_i0 PRJNA758088 201932 299 1.792035 5.35818465 Edaphobacter paludis 3035702 Bacteria Bacteria 501 2.3e-137   NTclustered gi|2737763816|gb|CP121194.1| 3035702 g194961 i0 96.99 264.234113712375 299 8 100 1 1 299 662671 662374 Edaphobacter paludis strain DSM 109919 chromosome, complete genome blastn 79006 501 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter paludis
15232583 15232583 PRJNA758088_P_NODE_51912_length_615_cov_1.900369_g45166_i0 PRJNA758088 51912 615 1.900369 11.68726935 Tunturiibacter 3154218 Bacteria Bacteria 1020 0   NTclustered gi|2304905231|gb|CP073696.1| 2051959 g45166 i0 96.585 103.547967479675 615 21 100 0 1 615 3200376 3199762 Tunturiibacter lichenicola strain DSM 104462 chromosome, complete genome blastn 63682 1020 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Tunturiibacter Tunturiibacter lichenicola
16038319 16038319 PRJNA758088_P_NODE_206013_length_296_cov_4.757848_g199042_i0 PRJNA758088 206013 296 4.757848 14.08323008 Edaphobacter paludis 3035702 Bacteria Bacteria 542 1.34e-149   NTclustered gi|2737763816|gb|CP121194.1| 3035702 g199042 i0 99.662 107.449324324324 296 1 100 0 1 296 663004 663299 Edaphobacter paludis strain DSM 109919 chromosome, complete genome blastn 31805 542 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter paludis
16040152 16040152 PRJNA758088_P_NODE_328673_length_245_cov_0.895349_g321702_i0 PRJNA758088 328673 245 0.895349 2.19360505 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 132 1.56e-33   NR HVG10073.1 2651171 g321702 i0 84 1.98367346938776 81 13 99.2 0 243 1 1755 1835 HVG10073.1 amino acid adenylation domain-containing protein [Thermoanaerobaculia bacterium] diamond 486 132 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
26714261 26714261 PRJNA758088_P_NODE_288401_length_250_cov_0.870056_g281430_i0 PRJNA758088 288401 250 0.870056 2.17514 Pseudomonadati 3379134 Bacteria Bacteria 77 3.34e-14   NR MDQ3010428.1 1978231 g281430 i0 47.9 2.604 71 37 85.2 0 227 15 92 162 MDQ3010428.1 DUF87 domain-containing protein [Acidobacteriota bacterium] diamond 651 77 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27021378 27021378 PRJNA758088_P_NODE_295222_length_249_cov_1.511364_g288251_i0 PRJNA758088 295222 249 1.511364 3.76329636 Candidatus Acidiferrales bacterium 2952895 Bacteria Bacteria 62.4 2.14e-9   NR HKO05849.1 2952895 g288251 i0 40.2 0.987951807228916 82 48 97.6 1 249 7 64 145 HKO05849.1 MIP family channel protein [Candidatus Acidiferrales bacterium] diamond 246 62.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales     Candidatus Acidiferrales bacterium
27306014 27306014 PRJNA758088_P_NODE_314603_length_247_cov_0.885057_g307632_i0 PRJNA758088 314603 247 0.885057 2.18609079 Edaphobacter paludis 3035702 Bacteria Bacteria 97.8 1.67e-21   NR WP_348266976.1 3035702 g307632 i0 60.4 1.28744939271255 106 18 99.6 2 246 1 126 231 WP_348266976.1 sensor histidine kinase [Edaphobacter paludis] diamond 318 97.8 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter paludis
28189761 28189761 PRJNA758088_P_NODE_285386_length_251_cov_0.865169_g278415_i0 PRJNA758088 285386 251 0.865169 2.17157419 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 92.4 9.85e-20   NR GIU75024.1 2212468 g278415 i0 97.9 0.573705179282869 48 1 57.4 0 107 250 1 48 GIU75024.1 MAG: acetoacetate metabolism regulatory protein AtoC [Bryobacteraceae bacterium] diamond 144 92.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
28821152 28821152 PRJNA758088_P_NODE_115148_length_390_cov_3.283912_g108178_i0 PRJNA758088 115148 390 3.283912 12.8072568 Candidatus Sulfotelmatobacter sp. 2771375 Bacteria Bacteria 51.2 9.05e-5   NR HTS14375.1 2771375 g108178 i0 39.3 0.646153846153846 84 44 63.8 4 16 264 106 183 HTS14375.1 hypothetical protein [Candidatus Sulfotelmatobacter sp.] diamond 252 51.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Candidatus Korobacteraceae Candidatus Sulfotelmatobacter Candidatus Sulfotelmatobacter sp.
28979513 28979513 PRJNA758088_P_NODE_286008_length_251_cov_0.865169_g279037_i0 PRJNA758088 286008 251 0.865169 2.17157419 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 131 1.6299999999999998e-35   NR HEU4691948.1 2910147 g279037 i0 84 0.968127490039841 81 13 96.8 0 250 8 187 267 HEU4691948.1 hypothetical protein [Vicinamibacterales bacterium] diamond 243 131 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
29358316 29358316 PRJNA758088_P_NODE_274849_length_254_cov_1.248619_g267878_i0 PRJNA758088 274849 254 1.248619 3.17149226 Terracidiphilus sp. 1964191 Bacteria Bacteria 59.7 2.14e-8   NR HEY6848938.1 1964191 g267878 i0 44.2 0.909448818897638 77 42 89.8 1 253 26 142 218 HEY6848938.1 ankyrin repeat domain-containing protein [Terracidiphilus sp.] diamond 231 59.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.
29462426 29462426 PRJNA758088_P_NODE_307250_length_248_cov_0.880000_g300279_i0 PRJNA758088 307250 248 0.88 2.1824 Bacteria 2 Bacteria Bacteria 143 9.62e-39   NR MCU1295494.1 2026791 g300279 i0 77.8 17.6733870967742 81 18 98 0 4 246 256 336 MCU1295494.1 hypothetical protein [Bryobacterales bacterium] diamond 4383 144 0.993055555555556 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
29926751 29926751 PRJNA758088_P_NODE_220791_length_287_cov_0.985981_g213820_i0 PRJNA758088 220791 287 0.985981 2.82976547 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 45.4 0.00568   NR MFN0172054.1 2212468 g213820 i0 39.5 0.794425087108014 76 42 76.3 2 15 233 139 213 MFN0172054.1 PEP-CTERM sorting domain-containing protein [Bryobacteraceae bacterium] diamond 228 45.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30116062 30116062 PRJNA758088_P_NODE_269092_length_257_cov_1.494565_g262121_i0 PRJNA758088 269092 257 1.494565 3.84103205 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 94 5.48e-22   NR HEX8150060.1 2283092 g262121 i0 90.2 2.38132295719844 51 5 59.5 0 1 153 120 170 HEX8150060.1 alpha/beta fold hydrolase [Pyrinomonadaceae bacterium] diamond 612 94 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30621569 30621569 PRJNA758088_P_NODE_270253_length_256_cov_2.229508_g263282_i0 PRJNA758088 270253 256 2.229508 5.70754048 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 161 7.47e-44   NR HUE84360.1 2283092 g263282 i0 94.1 6.9609375 85 5 99.6 0 2 256 45 129 HUE84360.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 1782 161 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30874455 30874455 PRJNA758088_P_NODE_304914_length_248_cov_0.880000_g297943_i0 PRJNA758088 304914 248 0.88 2.1824 Luteitalea sp. 2004800 Bacteria Bacteria 42.7 0.0401   NR WP_396624986.1 2004800 g297943 i0 39.7 0.701612903225806 58 32 66.5 1 214 50 161 218 WP_396624986.1 hypothetical protein [Luteitalea sp.] diamond 174 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales Vicinamibacteraceae Luteitalea Luteitalea sp.
31664709 31664709 PRJNA758088_P_NODE_282577_length_251_cov_0.865169_g275606_i0 PRJNA758088 282577 251 0.865169 2.17157419 Acidobacteriota bacterium 1978231 Bacteria Bacteria 65.9 2.13e-10   NR NBO66762.1 1978231 g275606 i0 45.5 0.920318725099602 77 41 90.8 1 24 251 178 254 NBO66762.1 hypothetical protein [Acidobacteriota bacterium] diamond 231 65.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31664728 31664728 PRJNA758088_P_NODE_347817_length_243_cov_0.905882_g340846_i0 PRJNA758088 347817 243 0.905882 2.20129326 Blastocatellia bacterium 2052146 Bacteria Bacteria 154 3.769999999999999e-46   NR HVF92611.1 2052146 g340846 i0 93.8 2.98765432098765 80 5 98.8 0 1 240 49 128 HVF92611.1 peroxiredoxin [Blastocatellia bacterium] diamond 726 154 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
31674509 31674509 PRJNA758088_P_NODE_255597_length_265_cov_1.541667_g248626_i0 PRJNA758088 255597 265 1.541667 4.08541755 Pseudomonadati 3379134 Bacteria Bacteria 116 1.06e-30   NR MDR3742231.1 1964191 g248626 i0 58.6 2.92075471698113 87 35 98.5 1 3 263 25 110 MDR3742231.1 hypothetical protein [Terracidiphilus sp.] diamond 774 117 0.991452991452991 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.
32266220 32266220 PRJNA758088_P_NODE_231318_length_280_cov_1.260870_g224347_i0 PRJNA758088 231318 280 1.26087 3.530436 Acidobacteriota bacterium 1978231 Bacteria Bacteria 80.9 1.35e-15   NR MFM2124719.1 1978231 g224347 i0 45.6 0.964285714285714 90 49 96.4 0 279 10 252 341 MFM2124719.1 hypothetical protein [Acidobacteriota bacterium] diamond 270 80.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32297982 32297982 PRJNA758088_P_NODE_288999_length_250_cov_0.870056_g282028_i0 PRJNA758088 288999 250 0.870056 2.17514 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 152 5.9899999999999996e-43   NR HUK37149.1 2910147 g282028 i0 88 3.984 83 10 99.6 0 250 2 199 281 HUK37149.1 hypothetical protein [Vicinamibacterales bacterium] diamond 996 152 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
32708196 32708196 PRJNA758088_P_NODE_337480_length_244_cov_0.900585_g330509_i0 PRJNA758088 337480 244 0.900585 2.1974274 Acidobacteriota bacterium 1978231 Bacteria Bacteria 78.6 9.43e-15   NR MBS1768271.1 1978231 g330509 i0 66.7 1.40163934426229 57 19 70.1 0 172 2 1194 1250 MBS1768271.1 hypothetical protein [Acidobacteriota bacterium] diamond 342 78.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;