RNAquarium Metadata Server
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contig_metadata

14 rows where bioproject = "PRJNA758088", tax_kingdom = "Orthornavirae" and tax_phylum = "Kitrinoviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 14 ✖

tax_kingdom 1

  • Orthornavirae · 14 ✖

bioproject 1

  • PRJNA758088 · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5842492 5842492 PRJNA758088_P_NODE_74645_length_494_cov_0.912114_g67682_i0 PRJNA758088 74645 494 0.912114 4.50584316 Bombyx mori Macula-like virus 288456 Viruses Viruses 880 0   NTclustered gi|612507560|gb|KJ433990.1| 288456 g67682 i0 98.785 3.98785425101215 494 6 100 0 1 494 1700 1207 Bombyx mori Macula-like virus strain SZ, complete genome blastn 1970 880 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae Maculavirus Bombyx mori Macula-like virus
10131673 10131673 PRJNA758088_P_NODE_135328_length_361_cov_1.604167_g128357_i0 PRJNA758088 135328 361 1.604167 5.79104287 root 1 Root_unresolved Root_unresolved 662 0   NTclustered gi|388240129|emb|HE818411.1| 12242 g128357 i0 99.723 100 361 1 100 0 1 361 1851 1491 Tobacco mosaic virus isolate Changle-9, complete genome blastn 36100 662 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
10132339 10132339 PRJNA758088_P_NODE_29908_length_876_cov_1.952677_g24295_i0 PRJNA758088 29908 876 1.952677 17.10545052 Tobamovirus 12234 Viruses Viruses 1541 0   NTclustered gi|823962666|gb|KR537870.1| 12253 g24295 i0 98.402 98.8002283105023 876 14 100 0 1 876 3770 2895 Tomato mosaic virus isolate 99-1, complete genome blastn 86549 1541 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
10939497 10939497 PRJNA758088_P_NODE_193949_length_305_cov_1.655172_g186978_i0 PRJNA758088 193949 305 1.655172 5.0482746 Bombyx mori latent virus 2065033 Viruses Viruses 514 3.02e-141   NTclustered gi|1464307034|ref|NC_038331.1| 2065033 g186978 i0 97.049 5.70819672131148 305 9 100 0 1 305 22 326 Bombyx mori latent virus genomic RNA, complete genome blastn 1741 514 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae   Bombyx mori latent virus
15232768 15232768 PRJNA758088_P_NODE_94192_length_433_cov_1.955556_g87222_i0 PRJNA758088 94192 433 1.955556 8.46755748 root 1 Root_unresolved Root_unresolved 773 0   NTclustered gi|388240245|emb|HE818440.1| 12242 g87222 i0 98.845 100 433 5 100 0 1 433 3007 2575 Tobacco mosaic virus isolate Shaoxing, complete genome blastn 43300 773 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
19054753 19054753 PRJNA758088_P_NODE_128635_length_370_cov_1.676768_g121664_i0 PRJNA758088 128635 370 1.676768 6.2040416 root 1 Root_unresolved Root_unresolved 684 0   NTclustered gi|388240277|emb|HE818448.1| 12242 g121664 i0 100 99.9864864864865 370 0 100 0 1 370 1061 692 Tobacco mosaic virus isolate Xifeng, complete genome blastn 36995 684 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
19055089 19055089 PRJNA758088_P_NODE_204755_length_297_cov_1.928571_g197784_i0 PRJNA758088 204755 297 1.928571 5.72785587 Maculavirus 249185 Viruses Viruses 531 2.9099999999999992e-146   NTclustered gi|612507560|gb|KJ433990.1| 288456 g197784 i0 98.986 4.16835016835017 296 3 99 0 1 296 6215 6510 Bombyx mori Macula-like virus strain SZ, complete genome blastn 1238 536 0.990671641791045 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae Maculavirus Bombyx mori Macula-like virus
20329905 20329905 PRJNA758088_P_NODE_237016_length_276_cov_2.655172_g230045_i0 PRJNA758088 237016 276 2.655172 7.32827472 root 1 Root_unresolved Root_unresolved 510 3.48e-140   NTclustered gi|388240277|emb|HE818448.1| 12242 g230045 i0 100 99.9891304347826 276 0 100 0 1 276 1463 1188 Tobacco mosaic virus isolate Xifeng, complete genome blastn 27597 510 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
21605058 21605058 PRJNA758088_P_NODE_109597_length_400_cov_1.770642_g102627_i0 PRJNA758088 109597 400 1.770642 7.082568 Tobamovirus 12234 Viruses Viruses 734 0   NTclustered gi|226235018|dbj|AB355139.1| 12253 g102627 i0 100 99.2375 397 0 99 0 1 397 5226 4830 Tomato mosaic virus genomic RNA, complete genome, strain: L11Y blastn 39695 734 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
21605599 21605599 PRJNA758088_P_NODE_234857_length_278_cov_1.126829_g227886_i0 PRJNA758088 234857 278 1.126829 3.13258462 Maculavirus 249185 Viruses Viruses 486 5.919999999999998e-133   NTclustered gi|612507560|gb|KJ433990.1| 288456 g227886 i0 98.201 4 278 5 100 0 1 278 3435 3158 Bombyx mori Macula-like virus strain SZ, complete genome blastn 1112 486 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae Maculavirus Bombyx mori Macula-like virus
22880484 22880484 PRJNA758088_P_NODE_116678_length_388_cov_1.314286_g109708_i0 PRJNA758088 116678 388 1.314286 5.09942968 Tobamovirus 12234 Viruses Viruses 712 0   NTclustered gi|2201440261|gb|OL652662.1| 12253 g109708 i0 99.742 98.7731958762887 388 1 100 0 1 388 2912 2525 Tomato mosaic virus isolate NVWA36783860, complete genome blastn 38324 712 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
25429548 25429548 PRJNA758088_P_NODE_117840_length_386_cov_1.629393_g110870_i0 PRJNA758088 117840 386 1.629393 6.28945698 root 1 Root_unresolved Root_unresolved 713 0   NTclustered gi|388240277|emb|HE818448.1| 12242 g110870 i0 100 99.7849740932643 386 0 100 0 1 386 2036 2421 Tobacco mosaic virus isolate Xifeng, complete genome blastn 38517 713 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
25430237 25430237 PRJNA758088_P_NODE_271740_length_256_cov_0.939891_g264769_i0 PRJNA758088 271740 256 0.939891 2.40612096 root 1 Root_unresolved Root_unresolved 457 4.22e-124   NTclustered gi|1590853303|gb|MH595921.1| 12242 g264769 i0 98.828 99.89453125 256 3 100 0 1 256 3146 3401 Tobacco mosaic virus isolate Mudanjiang, complete genome blastn 25573 457 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
29273110 29273110 PRJNA758088_P_NODE_342629_length_244_cov_0.900585_g335658_i0 PRJNA758088 342629 244 0.900585 2.1974274 Prunevirus 1914295 Viruses Viruses 85.9 2.54e-17   NR UIW14227.1 2560282 g335658 i0 80 1.22950819672131 50 10 61.5 0 150 1 1 50 UIW14227.1 MAG: replicase [Actinidia seed borne latent virus] diamond 300 86.7 0.990772779700115 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Prunevirus Prunevirus actinidiae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;