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contig_metadata

16 rows where bioproject = "PRJNA758088", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 16 ✖

tax_kingdom 1

  • Metazoa · 16 ✖

tax_clade 1

bioproject 1

  • PRJNA758088 · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3288831 3288831 PRJNA758088_P_NODE_330563_length_245_cov_0.895349_g323592_i0 PRJNA758088 330563 245 0.895349 2.19360505 Caenorhabditis elegans 6239 Nematoda Nematoda 448 2.41e-121   NTclustered gi|687865712|emb|LK927652.1| 6239 g323592 i0 99.592 3.15918367346939 245 1 100 0 1 245 96053 96297 Caenorhabditis elegans genome assembly C_elegans_Bristol_N2_v1_5_4 ,scaffold CELN2_scaffold0000108 blastn 774 448 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
16039968 16039968 PRJNA758088_P_NODE_316153_length_247_cov_0.885057_g309182_i0 PRJNA758088 316153 247 0.885057 2.18609079 Aphelenchoides besseyi 269767 Nematoda Nematoda 62.4 4.52e-9   NR KAI6213189.1 269767 g309182 i0 86.7 0.364372469635628 30 4 36.4 0 182 93 164 193 KAI6213189.1 Peptidase S8 S53 and Proprotein convertase domain containing protein [Aphelenchoides besseyi] diamond 90 62.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides besseyi
21138346 21138346 PRJNA758088_P_NODE_214377_length_291_cov_1.059633_g207406_i0 PRJNA758088 214377 291 1.059633 3.08353203 Caenorhabditis elegans 6239 Nematoda Nematoda 532 7.9e-147   NTclustered gi|1972266968|ref|NM_069112.7| 6239 g207406 i0 99.656 3 291 1 100 0 1 291 1120 830 Caenorhabditis elegans ELKS/RAB6-interacting/CAST family member 2 (F20C5.6), mRNA blastn 873 532 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
27242577 27242577 PRJNA758088_P_NODE_231023_length_280_cov_1.487923_g224052_i0 PRJNA758088 231023 280 1.487923 4.1661844 Parelaphostrongylus tenuis 148309 Nematoda Nematoda 61.2 6.67e-9   NR KAJ1358478.1 148309 g224052 i0 43.1 1.58571428571429 58 29 62.1 1 6 179 17 70 KAJ1358478.1 hypothetical protein KIN20_016909 [Parelaphostrongylus tenuis] diamond 444 61.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Parelaphostrongylus Parelaphostrongylus tenuis
27315815 27315815 PRJNA758088_P_NODE_352863_length_242_cov_1.242604_g345892_i0 PRJNA758088 352863 242 1.242604 3.00710168 root 1 Root_unresolved Root_unresolved 62 1.9e-10   NR KRY44571.1 6337 g345892 i0 41.6 11.9380165289256 77 42 91.7 2 21 242 4 80 KRY44571.1 26S protease regulatory subunit 6A-A, partial [Trichinella pseudospiralis] diamond 2889 62.4 0.993589743589744 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella pseudospiralis
28610316 28610316 PRJNA758088_P_NODE_307887_length_248_cov_0.880000_g300916_i0 PRJNA758088 307887 248 0.88 2.1824 root 1 Root_unresolved Root_unresolved 43.1 0.0289   NR VDP48748.1 6339 g300916 i0 32.4 3.52016129032258 68 41 76.2 1 7 195 332 399 VDP48748.1 unnamed protein product [Heligmosomoides polygyrus] diamond 873 43.5 0.990804597701149 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Heligmosomoides Heligmosomoides polygyrus
28821172 28821172 PRJNA758088_P_NODE_292348_length_250_cov_0.870056_g285377_i0 PRJNA758088 292348 250 0.870056 2.17514 Bursaphelenchus xylophilus 6326 Nematoda Nematoda 165 5.129999999999999e-47   NR CAD5226652.1 6326 g285377 i0 100 0.996 83 0 99.6 0 250 2 245 327 CAD5226652.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 249 165 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
29105826 29105826 PRJNA758088_P_NODE_73088_length_500_cov_1.182670_g66126_i0 PRJNA758088 73088 500 1.18267 5.91335 Trichuris suis 68888 Nematoda Nematoda 111 7.78e-25   NR KFD60188.1 68888 g66126 i0 52.9 0.612 102 48 61.2 0 194 499 343 444 KFD60188.1 hypothetical protein M514_27632 [Trichuris suis] diamond 306 111 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris suis
29683436 29683436 PRJNA758088_P_NODE_218790_length_288_cov_1.172093_g211819_i0 PRJNA758088 218790 288 1.172093 3.37562784 Opisthokonta 33154 Nematoda Nematoda 122 6.54e-30   NR CAJ0587205.1 96644 g211819 i0 58.9 31.6666666666667 95 39 99 0 286 2 92 186 CAJ0587205.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 9120 122 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
29800148 29800148 PRJNA758088_P_NODE_144131_length_350_cov_3.779783_g137160_i0 PRJNA758088 144131 350 3.779783 13.2292405 Pristionchus fissidentatus 1538716 Nematoda Nematoda 127 1.09e-35   NR GMT14341.1 1538716 g137160 i0 65.6 1.58571428571429 93 31 79.7 1 293 15 7 98 GMT14341.1 hypothetical protein PFISCL1PPCAC_5638, partial [Pristionchus fissidentatus] diamond 555 127 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
30684749 30684749 PRJNA758088_P_NODE_205313_length_297_cov_1.321429_g198342_i0 PRJNA758088 205313 297 1.321429 3.92464413 Aphelenchoides bicaudatus 293665 Nematoda Nematoda 80.5 3.91e-15   NR KAI6184773.1 293665 g198342 i0 39.4 1 99 59 100 1 297 1 62 159 KAI6184773.1 hypothetical protein M3Y97_00632300 [Aphelenchoides bicaudatus] diamond 297 80.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides bicaudatus
30779666 30779666 PRJNA758088_P_NODE_124134_length_377_cov_0.950658_g117163_i0 PRJNA758088 124134 377 0.950658 3.58398066 Heligmosomoides polygyrus 6339 Nematoda Nematoda 45.8 0.0132   NR VDP48748.1 6339 g117163 i0 31.9 0.549071618037135 69 42 50.9 1 198 7 331 399 VDP48748.1 unnamed protein product [Heligmosomoides polygyrus] diamond 207 45.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Heligmosomoides Heligmosomoides polygyrus
31253635 31253635 PRJNA758088_P_NODE_324295_length_246_cov_0.890173_g317324_i0 PRJNA758088 324295 246 0.890173 2.18982558 Ditylenchus destructor 166010 Nematoda Nematoda 99.4 1.24e-22   NR KAI1722968.1 166010 g317324 i0 59.2 13.1341463414634 76 31 92.7 0 244 17 133 208 KAI1722968.1 enoyl-CoA hydratase/isomerase domain-containing protein [Ditylenchus destructor] diamond 3231 99.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
32139444 32139444 PRJNA758088_P_NODE_288718_length_250_cov_0.870056_g281747_i0 PRJNA758088 288718 250 0.870056 2.17514 Meloidogyne enterolobii 390850 Nematoda Nematoda 98.6 9.32e-25   NR CAD2207035.1 390850 g281747 i0 72.4 0.696 58 16 69.6 0 249 76 6 63 CAD2207035.1 unnamed protein product [Meloidogyne enterolobii] diamond 174 98.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
32392514 32392514 PRJNA758088_P_NODE_305919_length_248_cov_0.880000_g298948_i0 PRJNA758088 305919 248 0.88 2.1824 Trichuris suis 68888 Nematoda Nematoda 60.8 6.48e-9   NR KFD48208.1 68888 g298948 i0 41.5 2.96370967741935 82 44 96.8 3 1 240 56 135 KFD48208.1 hypothetical protein M513_10922 [Trichuris suis] diamond 735 60.8 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris suis
32771092 32771092 PRJNA758088_P_NODE_326560_length_246_cov_0.890173_g319589_i0 PRJNA758088 326560 246 0.890173 2.18982558 Trichinella sp. T6 92179 Nematoda Nematoda 40.8 0.0147   NR KRX29138.1 92179 g319589 i0 72 0.304878048780488 25 7 30.5 0 42 116 13 37 KRX29138.1 hypothetical protein T06_9644 [Trichinella sp. T6] diamond 75 40.8 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella sp. T6

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;