RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA758088", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA758088 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3287403 3287403 PRJNA758088_P_NODE_234283_length_278_cov_1.502439_g227312_i0 PRJNA758088 234283 278 1.502439 4.17678042 Antonospora locustae 278021 Fungi Fungi 514 2.7199999999999996e-141   NTclustered gi|2646807101|gb|PP084052.1| 278021 g227312 i0 100 1 278 0 100 0 1 278 846 569 Antonospora locustae isolate PL sporoplasm surface protein 1 (SSP1) gene, complete cds blastn 278 514 1 Eukaryota Opisthokonta Fungi Microsporidia       Antonospora Antonospora locustae
27179210 27179210 PRJNA758088_P_NODE_215502_length_290_cov_1.336406_g208531_i0 PRJNA758088 215502 290 1.336406 3.8755774 Nematocida homosporus 1912981 Fungi Fungi 56.6 8.09e-7   NR XP_051346222.1 1912981 g208531 i0 41.5 0.848275862068966 82 40 82.8 4 51 290 291 366 XP_051346222.1 lysophosphatidic acid phosphatase type 6 [Nematocida homosporus] diamond 246 56.6 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida homosporus
27558302 27558302 PRJNA758088_P_NODE_238704_length_275_cov_2.089109_g231733_i0 PRJNA758088 238704 275 2.089109 5.74504975 Paranosema locustae 235221 Fungi Fungi 147 1.94e-43   NR 6ZU5_LW0 235221 g231733 i0 100 0.850909090909091 78 0 85.1 0 273 40 56 133 6ZU5_LW0 Chain LW0, eL24 [Paranosema locustae] diamond 234 147 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Paranosema Paranosema locustae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;