RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA758088", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA758088 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27179233 27179233 PRJNA758088_P_NODE_54402_length_597_cov_3.578244_g47607_i0 PRJNA758088 54402 597 3.578244 21.36211668 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 86.7 1e-16   NR TEB19254.1 2494336 g47607 i0 31.2 1.08040201005025 215 127 99.5 6 596 3 17 227 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 645 86.7 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
30116077 30116077 PRJNA758088_P_NODE_324752_length_246_cov_0.890173_g317781_i0 PRJNA758088 324752 246 0.890173 2.18982558 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 77 3.25e-14   NR KAF4719224.1 32597 g317781 i0 43.8 3.89024390243902 80 44 97.6 1 244 5 394 472 KAF4719224.1 hypothetical protein FOZ62_028924 [Perkinsus olseni] diamond 957 77 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
32896987 32896987 PRJNA758088_P_NODE_50840_length_623_cov_2.250909_g44109_i0 PRJNA758088 50840 623 2.250909 14.02316307 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 131 8.39e-34   NR TEB19254.1 2494336 g44109 i0 49 0.756019261637239 157 77 75.6 2 604 134 110 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 471 131 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;