RNAquarium Metadata Server
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contig_metadata

16 rows where bioproject = "PRJNA758087" and tax_phylum = "Kitrinoviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 16 ✖

tax_kingdom 1

bioproject 1

  • PRJNA758087 · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
733508 733508 PRJNA758087_P_NODE_34121_length_348_cov_5.814545_g32801_i0 PRJNA758087 34121 348 5.814545 20.2346166 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.033   NTclustered gi|1995060321|gb|MN450069.1| 12164 g32801 i0 100 0.0804597701149425 28 0 8 0 321 348 41 14 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
3284959 3284959 PRJNA758087_P_NODE_37363_length_304_cov_2.714286_g36043_i0 PRJNA758087 37363 304 2.714286 8.25142944 Jujube closterovirus 1 3043313 Viruses Viruses 52.8 0.028   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g36043 i0 100 0.0921052631578947 28 0 9 0 1 28 7 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
5836780 5836780 PRJNA758087_P_NODE_21265_length_583_cov_17.607843_g19953_i0 PRJNA758087 21265 583 17.607843 102.65372469 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.016   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g19953 i0 100 0.0497427101200686 29 0 5 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
5837086 5837086 PRJNA758087_P_NODE_32065_length_378_cov_8.524590_g30745_i0 PRJNA758087 32065 378 8.52459 32.2229502 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.036   NTclustered gi|1995060321|gb|MN450069.1| 12164 g30745 i0 100 0.0740740740740741 28 0 7 0 5 32 14 41 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
8387083 8387083 PRJNA758087_P_NODE_42107_length_249_cov_0.875000_g40787_i0 PRJNA758087 42107 249 0.875 2.17875 Tobamovirus tomatotessellati 3432892 Viruses Viruses 396 9.039999999999997e-106   NTclustered gi|2744300783|gb|PP915779.1| 12253 g40787 i0 99.541 87.5301204819277 218 0 88 1 1 218 5353 5137 Tomato mosaic virus isolate Pi20, complete genome blastn 21795 396 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
10131375 10131375 PRJNA758087_P_NODE_27048_length_462_cov_6.568123_g25728_i0 PRJNA758087 27048 462 6.568123 30.34472826 root 1 Root_unresolved Root_unresolved 54.7 0.012   NTclustered gi|1995060321|gb|MN450069.1| 12164 g25728 i0 100 0.322510822510823 29 0 6 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 149 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
16036246 16036246 PRJNA758087_P_NODE_34413_length_344_cov_11.859779_g33093_i0 PRJNA758087 34413 344 11.859779 40.79763976 Jujube closterovirus 1 3043313 Viruses Viruses 52.8 0.033   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g33093 i0 100 0.0813953488372093 28 0 8 0 1 28 7 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
17780390 17780390 PRJNA758087_P_NODE_13034_length_847_cov_70.385013_g11852_i0 PRJNA758087 13034 847 70.385013 596.16106011 root 1 Root_unresolved Root_unresolved 56.5 0.007   NTclustered gi|1995060321|gb|MN450069.1| 12164 g11852 i0 100 0.0743801652892562 30 0 4 0 1 30 13 42 Carnation latent virus isolate KL, complete genome blastn 63 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
17780483 17780483 PRJNA758087_P_NODE_30154_length_409_cov_1.982143_g28834_i0 PRJNA758087 30154 409 1.982143 8.10696487 root 1 Root_unresolved Root_unresolved 56.5 0.003   NTclustered gi|1995060321|gb|MN450069.1| 12164 g28834 i0 97.059 0.156479217603912 34 0 8 1 377 409 41 8 Carnation latent virus isolate KL, complete genome blastn 64 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
18585196 18585196 PRJNA758087_P_NODE_24595_length_510_cov_11.652174_g23275_i0 PRJNA758087 24595 510 11.652174 59.4260874 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.014   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g23275 i0 100 0.111764705882353 29 0 6 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
19860384 19860384 PRJNA758087_P_NODE_26476_length_473_cov_10.170000_g25156_i0 PRJNA758087 26476 473 10.17 48.1041 Carlavirus latensdianthi 3427766 Viruses Viruses 58.4 0.001   NTclustered gi|1995060321|gb|MN450069.1| 12164 g25156 i0 97.143 0.361522198731501 35 0 7 1 1 35 8 41 Carnation latent virus isolate KL, complete genome blastn 171 58.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
19860758 19860758 PRJNA758087_P_NODE_40656_length_264_cov_1.607330_g39336_i0 PRJNA758087 40656 264 1.60733 4.2433512 Allexivirus ecsascalonicum 3433713 Viruses Viruses 58.4 5.18e-4   NTclustered gi|1678654015|gb|MH389250.1| 31770 g39336 i0 100 2.50378787878788 31 0 12 0 217 247 87 57 Shallot virus X isolate 13-04-2, complete genome blastn 661 58.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Allexivirus Allexivirus ecsascalonicum
21135773 21135773 PRJNA758087_P_NODE_20697_length_598_cov_1.702857_g19387_i0 PRJNA758087 20697 598 1.702857 10.18308486 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.016   NTclustered gi|1995060321|gb|MN450069.1| 12164 g19387 i0 100 0.048494983277592 29 0 5 0 570 598 42 14 Carnation latent virus isolate KL, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
22410799 22410799 PRJNA758087_P_NODE_28718_length_433_cov_2.841667_g27398_i0 PRJNA758087 28718 433 2.841667 12.30441811 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.012   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g27398 i0 100 0.131639722863741 29 0 7 0 405 433 34 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
22411295 22411295 PRJNA758087_P_NODE_7998_length_1171_cov_94.455373_g7046_i0 PRJNA758087 7998 1171 94.455373 1106.07241783 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.033   NTclustered gi|1995060321|gb|MN450069.1| 12164 g7046 i0 100 0.0247651579846285 29 0 2 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
28568798 28568798 PRJNA758087_P_NODE_14467_length_787_cov_6.567227_g13250_i0 PRJNA758087 14467 787 6.567227 51.68407649 Phytophthora cactorum alphaendornavirus 4 3367732 Viruses Viruses 67 2e-8   NR BFT85754.1 3367732 g13250 i0 26.9 0.693773824650572 182 128 68.2 4 106 642 2040 2219 BFT85754.1 polyprotein [Phytophthora cactorum alphaendornavirus 4] diamond 546 67 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Phytophthora cactorum alphaendornavirus 4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;