RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA758087" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA758087 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12212658 12212658 PRJNA758087_P_NODE_16670_length_709_cov_16.746855_g15407_i0 PRJNA758087 16670 709 16.746855 118.73520195 Methanococcoides burtonii 29291 Archaea Archaea 54.7 0.02   NTclustered gi|91711097|gb|CP000300.1| 259564 g15407 i0 94.286 0.0493653032440056 35 2 5 0 668 702 292375 292409 Methanococcoides burtonii DSM 6242, complete genome blastn 35 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanococcoides Methanococcoides burtonii
14762616 14762616 PRJNA758087_P_NODE_37192_length_307_cov_1.008547_g35872_i0 PRJNA758087 37192 307 1.008547 3.09623929 Haladaptatus salinisoli 2884876 Archaea Archaea 62.1 4.76e-5   NTclustered gi|2124061132|gb|CP085327.1| 2884876 g35872 i0 100 2.53094462540717 33 0 11 0 233 265 1318473 1318505 Haladaptatus salinisoli strain PSR8 chromosome, complete genome blastn 777 62.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Haladaptatus Haladaptatus salinisoli

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;