RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA757618", tax_phylum = "Preplasmiviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Preplasmiviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA757618 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7580470 7580470 PRJNA757618_P_NODE_37546_length_247_cov_0.890805_g36494_i0 PRJNA757618 37546 247 0.890805 2.20028835 root 1 Root_unresolved Root_unresolved 435 1.9e-117   NTclustered gi|2079660852|emb|OU501478.1| 10515 g36494 i0 98.394 100.80971659919 249 0 100 3 1 247 12700 12454 Human adenovirus 2 isolate ADVJA-00-BE genome assembly, chromosome: ADVJA-00-BE blastn 24900 435 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
11406180 11406180 PRJNA757618_P_NODE_20049_length_276_cov_1.536946_g18997_i0 PRJNA757618 20049 276 1.536946 4.24197096 root 1 Root_unresolved Root_unresolved 508 1.2499999999999999e-139   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g18997 i0 100 99.6376811594203 275 0 99 0 2 276 17408 17682 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 27500 508 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
12682278 12682278 PRJNA757618_P_NODE_49330_length_204_cov_13.618321_g48278_i0 PRJNA757618 49330 204 13.618321 27.78137484 root 1 Root_unresolved Root_unresolved 368 1.56e-97   NTclustered gi|2620236085|gb|OR777220.1| 10515 g48278 i0 100 97.5490196078431 199 0 98 0 6 204 15223 15025 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 19900 368 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
22880190 22880190 PRJNA757618_P_NODE_7858_length_403_cov_3.612121_g6806_i0 PRJNA757618 7858 403 3.612121 14.55684763 root 1 Root_unresolved Root_unresolved 725 0   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g6806 i0 99.499 99.0074441687345 399 1 99 1 1 398 11551 11153 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 39900 730 0.993150684931507 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;