contig_metadata
13 rows where bioproject = "PRJNA757618" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 732473 | 732473 | PRJNA757618_P_NODE_30581_length_251_cov_0.865169_g29529_i0 | PRJNA757618 | 30581 | 251 | 0.865169 | 2.17157419 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 183 | 7.73e-42 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g29529 | i0 | 79.921 | 1.01195219123506 | 254 | 48 | 100 | 2 | 1 | 251 | 787443 | 787696 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 254 | 183 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 13486562 | 13486562 | PRJNA757618_P_NODE_47471_length_242_cov_0.923077_g46419_i0 | PRJNA757618 | 47471 | 242 | 0.923077 | 2.23384634 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 309 | 1.17e-79 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g46419 | i0 | 89.712 | 34.5495867768595 | 243 | 23 | 100 | 2 | 1 | 242 | 3864056 | 3864297 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 8361 | 309 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 14761473 | 14761473 | PRJNA757618_P_NODE_30212_length_251_cov_0.870787_g29160_i0 | PRJNA757618 | 30212 | 251 | 0.870787 | 2.18567537 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 124 | 1.61e-31 | NR | HEU5175800.1 | 2026741 | g29160 | i0 | 68.4 | 2.78486055776892 | 79 | 25 | 94.4 | 0 | 250 | 14 | 45 | 123 | HEU5175800.1 erythromycin esterase family protein [Gemmatimonadaceae bacterium] | diamond | 699 | 124 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 21135059 | 21135059 | PRJNA757618_P_NODE_29477_length_251_cov_0.876404_g28425_i0 | PRJNA757618 | 29477 | 251 | 0.876404 | 2.19977404 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 167 | 7.789999999999999e-37 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g28425 | i0 | 81.221 | 0.848605577689243 | 213 | 34 | 84 | 4 | 42 | 251 | 3440775 | 3440566 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 213 | 167 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 24959092 | 24959092 | PRJNA757618_P_NODE_30480_length_251_cov_0.865169_g29428_i0 | PRJNA757618 | 30480 | 251 | 0.865169 | 2.17157419 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 180 | 1e-40 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g29428 | i0 | 86.228 | 5.60159362549801 | 167 | 21 | 66 | 2 | 1 | 166 | 4245438 | 4245603 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 1406 | 180 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 27274248 | 27274248 | PRJNA757618_P_NODE_34323_length_249_cov_0.875000_g33271_i0 | PRJNA757618 | 34323 | 249 | 0.875 | 2.17875 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 152 | 5.139999999999999e-42 | NR | HET8713385.1 | 2448054 | g33271 | i0 | 93.9 | 0.987951807228916 | 82 | 5 | 98.8 | 0 | 2 | 247 | 41 | 122 | HET8713385.1 FAD-binding oxidoreductase [Gemmatimonadales bacterium] | diamond | 246 | 152 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 28632219 | 28632219 | PRJNA757618_P_NODE_19327_length_279_cov_2.184466_g18275_i0 | PRJNA757618 | 19327 | 279 | 2.184466 | 6.09466014 | Gemmatimonadetes bacterium T265 | 2839016 | Bacteria | Bacteria | 121 | 7.04e-30 | NR | GJG85342.1 | 2839016 | g18275 | i0 | 78.3 | 0.989247311827957 | 92 | 14 | 98.9 | 3 | 278 | 3 | 380 | 465 | GJG85342.1 hypothetical protein tb265_05230 [Gemmatimonadetes bacterium T265] | diamond | 276 | 121 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadetes bacterium T265 | |||||
| 28789721 | 28789721 | PRJNA757618_P_NODE_34047_length_249_cov_0.880682_g32995_i0 | PRJNA757618 | 34047 | 249 | 0.880682 | 2.19289818 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 86.3 | 1.84e-17 | NR | NUP55471.1 | 2026741 | g32995 | i0 | 69.4 | 1.51807228915663 | 62 | 18 | 73.5 | 1 | 185 | 3 | 2 | 63 | NUP55471.1 SusD/RagB family nutrient-binding outer membrane lipoprotein [Gemmatimonadaceae bacterium] | diamond | 378 | 86.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 30558261 | 30558261 | PRJNA757618_P_NODE_45673_length_243_cov_0.911765_g44621_i0 | PRJNA757618 | 45673 | 243 | 0.911765 | 2.21558895 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 49.7 | 9.5e-5 | NR | HEU0013642.1 | 2029185 | g44621 | i0 | 43.2 | 0.91358024691358 | 74 | 39 | 88.9 | 2 | 218 | 3 | 150 | 222 | HEU0013642.1 hypothetical protein [Longimicrobium sp.] | diamond | 222 | 49.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 31032680 | 31032680 | PRJNA757618_P_NODE_35475_length_248_cov_0.891429_g34423_i0 | PRJNA757618 | 35475 | 248 | 0.891429 | 2.21074392 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 106 | 1.5e-25 | NR | HEX9892793.1 | 2448054 | g34423 | i0 | 58.4 | 0.931451612903226 | 77 | 32 | 93.1 | 0 | 6 | 236 | 153 | 229 | HEX9892793.1 hypothetical protein [Gemmatimonadales bacterium] | diamond | 231 | 106 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 31864236 | 31864236 | PRJNA757618_P_NODE_24057_length_261_cov_1.382979_g23005_i0 | PRJNA757618 | 24057 | 261 | 1.382979 | 3.60957519 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 142 | 2.83e-38 | NR | HKW41145.1 | 2448054 | g23005 | i0 | 75.6 | 4.94252873563218 | 86 | 21 | 98.9 | 0 | 259 | 2 | 277 | 362 | HKW41145.1 IS1182 family transposase [Gemmatimonadales bacterium] | diamond | 1290 | 143 | 0.993006993006993 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 32044456 | 32044456 | PRJNA757618_P_NODE_47858_length_242_cov_0.917160_g46806_i0 | PRJNA757618 | 47858 | 242 | 0.91716 | 2.2195272 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 128 | 2.88e-36 | NR | MEO7137140.1 | 2448054 | g46806 | i0 | 77.2 | 1.95867768595041 | 79 | 18 | 97.9 | 0 | 242 | 6 | 14 | 92 | MEO7137140.1 four helix bundle protein [Gemmatimonadales bacterium] | diamond | 474 | 128 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 32275972 | 32275972 | PRJNA757618_P_NODE_26718_length_253_cov_0.866667_g25666_i0 | PRJNA757618 | 26718 | 253 | 0.866667 | 2.19266751 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 116 | 1.72e-28 | NR | MEW5917188.1 | 2026742 | g25666 | i0 | 62.7 | 7.79051383399209 | 83 | 31 | 98.4 | 0 | 249 | 1 | 16 | 98 | MEW5917188.1 FAD-binding oxidoreductase [Gemmatimonadota bacterium] | diamond | 1971 | 117 | 0.991452991452991 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;