contig_metadata
16 rows where bioproject = "PRJNA757618", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10936658 | 10936658 | PRJNA757618_P_NODE_33969_length_249_cov_0.880682_g32917_i0 | PRJNA757618 | 33969 | 249 | 0.880682 | 2.19289818 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 333 | 7.189999999999999e-87 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g32917 | i0 | 90.763 | 6.61044176706827 | 249 | 23 | 100 | 0 | 1 | 249 | 1251079 | 1251327 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 1646 | 333 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 10936950 | 10936950 | PRJNA757618_P_NODE_9749_length_358_cov_1.073684_g8697_i0 | PRJNA757618 | 9749 | 358 | 1.073684 | 3.84378872 | Luteolibacter sp. Populi | 3230487 | Bacteria | Bacteria | 473 | 6.11e-129 | NTclustered | gi|2774618348|gb|CP161812.1| | 3230487 | g8697 | i0 | 90.503 | 275.991620111732 | 358 | 34 | 100 | 0 | 1 | 358 | 1320102 | 1319745 | Luteolibacter sp. Populi chromosome, complete genome | blastn | 98805 | 473 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. Populi | |
| 17310873 | 17310873 | PRJNA757618_P_NODE_48394_length_242_cov_0.911243_g47342_i0 | PRJNA757618 | 48394 | 242 | 0.911243 | 2.20520806 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 146 | 2.45e-41 | NR | MBC8010943.1 | 2006848 | g47342 | i0 | 86.3 | 1.97107438016529 | 80 | 11 | 99.2 | 0 | 2 | 241 | 80 | 159 | MBC8010943.1 hypothetical protein [Opitutaceae bacterium] | diamond | 477 | 146 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 26999322 | 26999322 | PRJNA757618_P_NODE_30162_length_251_cov_0.870787_g29110_i0 | PRJNA757618 | 30162 | 251 | 0.870787 | 2.18567537 | Bacteria | 2 | Bacteria | Bacteria | 144 | 7.05e-38 | NR | KAB2638401.1 | 2026799 | g29110 | i0 | 80.7 | 12.8964143426295 | 83 | 16 | 99.2 | 0 | 250 | 2 | 391 | 473 | KAB2638401.1 MAG: primosomal protein N', partial [Verrucomicrobiota bacterium] | diamond | 3237 | 144 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27084600 | 27084600 | PRJNA757618_P_NODE_22542_length_266_cov_3.668394_g21490_i0 | PRJNA757618 | 22542 | 266 | 3.668394 | 9.75792804 | Terrimicrobiaceae bacterium | 2832348 | Bacteria | Bacteria | 70.5 | 8.67e-12 | NR | HEY5814276.1 | 2832348 | g21490 | i0 | 50.6 | 0.958646616541353 | 85 | 40 | 93.6 | 2 | 16 | 264 | 242 | 326 | HEY5814276.1 reverse transcriptase domain-containing protein [Terrimicrobiaceae bacterium] | diamond | 255 | 70.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Terrimicrobiia | Terrimicrobiales | Terrimicrobiaceae | Terrimicrobiaceae bacterium | ||
| 27400727 | 27400727 | PRJNA757618_P_NODE_37803_length_247_cov_0.890805_g36751_i0 | PRJNA757618 | 37803 | 247 | 0.890805 | 2.20028835 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 43.1 | 0.0242 | NR | HEX8297200.1 | 2811408 | g36751 | i0 | 33.8 | 0.862348178137652 | 71 | 36 | 83.8 | 2 | 211 | 5 | 8 | 69 | HEX8297200.1 hypothetical protein [Chthoniobacteraceae bacterium] | diamond | 213 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 27842475 | 27842475 | PRJNA757618_P_NODE_35484_length_248_cov_0.891429_g34432_i0 | PRJNA757618 | 35484 | 248 | 0.891429 | 2.21074392 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 146 | 4.91e-40 | NR | RPJ34588.1 | 2026800 | g34432 | i0 | 84.1 | 2.9758064516129 | 82 | 13 | 99.2 | 0 | 246 | 1 | 17 | 98 | RPJ34588.1 MAG: hypothetical protein EHM17_06015 [Verrucomicrobiaceae bacterium] | diamond | 738 | 146 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 28253035 | 28253035 | PRJNA757618_P_NODE_29366_length_251_cov_0.876404_g28314_i0 | PRJNA757618 | 29366 | 251 | 0.876404 | 2.19977404 | Candidatus Udaeobacter sp. | 2665650 | Bacteria | Bacteria | 43.9 | 0.0153 | NR | HYY24742.1 | 2665650 | g28314 | i0 | 69 | 0.346613545816733 | 29 | 9 | 34.7 | 0 | 164 | 250 | 5 | 33 | HYY24742.1 ABC transporter substrate-binding protein [Candidatus Udaeobacter sp.] | diamond | 87 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Candidatus Udaeobacter | Candidatus Udaeobacter sp. | |
| 28537475 | 28537475 | PRJNA757618_P_NODE_26807_length_253_cov_0.866667_g25755_i0 | PRJNA757618 | 26807 | 253 | 0.866667 | 2.19266751 | Candidatus Udaeobacter sp. | 2665650 | Bacteria | Bacteria | 169 | 1.03e-46 | NR | HEY4271554.1 | 2665650 | g25755 | i0 | 91.7 | 1.99209486166008 | 84 | 7 | 99.6 | 0 | 1 | 252 | 742 | 825 | HEY4271554.1 PEP/pyruvate-binding domain-containing protein [Candidatus Udaeobacter sp.] | diamond | 504 | 169 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Candidatus Udaeobacter | Candidatus Udaeobacter sp. | |
| 29873264 | 29873264 | PRJNA757618_P_NODE_43511_length_244_cov_0.906433_g42459_i0 | PRJNA757618 | 43511 | 244 | 0.906433 | 2.21169652 | Bacteria | 2 | Bacteria | Bacteria | 138 | 6.25e-36 | NR | MSU68781.1 | 2006848 | g42459 | i0 | 78.8 | 3.98360655737705 | 80 | 17 | 98.4 | 0 | 3 | 242 | 302 | 381 | MSU68781.1 TonB-dependent receptor [Opitutaceae bacterium] | diamond | 972 | 138 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 30147481 | 30147481 | PRJNA757618_P_NODE_43232_length_244_cov_0.912281_g42180_i0 | PRJNA757618 | 43232 | 244 | 0.912281 | 2.22596564 | Terrimicrobiaceae bacterium | 2832348 | Bacteria | Bacteria | 103 | 3.63e-24 | NR | HET9524272.1 | 2832348 | g42180 | i0 | 100 | 0.676229508196721 | 55 | 0 | 67.6 | 0 | 165 | 1 | 1 | 55 | HET9524272.1 glutaminase A [Terrimicrobiaceae bacterium] | diamond | 165 | 103 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Terrimicrobiia | Terrimicrobiales | Terrimicrobiaceae | Terrimicrobiaceae bacterium | ||
| 31126823 | 31126823 | PRJNA757618_P_NODE_37315_length_247_cov_0.896552_g36263_i0 | PRJNA757618 | 37315 | 247 | 0.896552 | 2.21448344 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 150 | 8.869999999999999e-43 | NR | MES2697009.1 | 2026799 | g36263 | i0 | 87.5 | 0.97165991902834 | 80 | 10 | 97.2 | 0 | 245 | 6 | 77 | 156 | MES2697009.1 dihydrodipicolinate synthase family protein [Verrucomicrobiota bacterium] | diamond | 240 | 150 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31981017 | 31981017 | PRJNA757618_P_NODE_38178_length_247_cov_0.885057_g37126_i0 | PRJNA757618 | 38178 | 247 | 0.885057 | 2.18609079 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 145 | 1.98e-38 | NR | MCW0216794.1 | 1965333 | g37126 | i0 | 86.3 | 0.97165991902834 | 80 | 11 | 97.2 | 0 | 242 | 3 | 392 | 471 | MCW0216794.1 DEAD/DEAH box helicase [Prosthecobacter sp.] | diamond | 240 | 145 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. | |
| 32202683 | 32202683 | PRJNA757618_P_NODE_31078_length_250_cov_0.881356_g30026_i0 | PRJNA757618 | 31078 | 250 | 0.881356 | 2.20339 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 43.9 | 0.0156 | NR | MCP5526627.1 | 2026801 | g30026 | i0 | 28.6 | 1.008 | 84 | 49 | 87.6 | 2 | 245 | 27 | 403 | 486 | MCP5526627.1 glycoside hydrolase family 95 protein [Verrucomicrobiales bacterium] | diamond | 252 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 32234579 | 32234579 | PRJNA757618_P_NODE_17818_length_286_cov_1.464789_g16766_i0 | PRJNA757618 | 17818 | 286 | 1.464789 | 4.18929654 | Luteolibacter arcticus | 1581411 | Bacteria | Bacteria | 88.2 | 9.19e-21 | NR | WP_264486745.1 | 1581411 | g16766 | i0 | 90 | 1.04895104895105 | 50 | 5 | 52.4 | 0 | 2 | 151 | 17 | 66 | WP_264486745.1 DUF2997 domain-containing protein [Luteolibacter arcticus] | diamond | 300 | 88.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter arcticus | |
| 32812375 | 32812375 | PRJNA757618_P_NODE_11680_length_332_cov_0.899614_g10628_i0 | PRJNA757618 | 11680 | 332 | 0.899614 | 2.98671848 | root | 1 | Root_unresolved | Root_unresolved | 47.4 | 0.00142 | NR | HWW51940.1 | 2499141 | g10628 | i0 | 43 | 1.91566265060241 | 79 | 43 | 71.4 | 2 | 252 | 16 | 43 | 119 | HWW51940.1 class I SAM-dependent methyltransferase [Verrucomicrobiia bacterium] | diamond | 636 | 47.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;