RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA757618", tax_clade = "FCB group" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA757618 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23685633 23685633 PRJNA757618_P_NODE_37419_length_247_cov_0.896552_g36367_i0 PRJNA757618 37419 247 0.896552 2.21448344 Rhodothermales bacterium 2306054 Bacteria Bacteria 65.5 3.49e-10   NR MBE2185506.1 2306054 g36367 i0 44.4 0.983805668016194 81 44 98.4 1 3 245 171 250 MBE2185506.1 DUF819 family protein [Rhodothermales bacterium] diamond 243 65.5 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
28799450 28799450 PRJNA757618_P_NODE_21787_length_269_cov_1.586735_g20735_i0 PRJNA757618 21787 269 1.586735 4.26831715 Bacteria 2 Bacteria Bacteria 63.5 2.38e-9   NR WP_259219643.1 146919 g20735 i0 71.1 1.38289962825279 45 13 50.2 0 45 179 126 170 WP_259219643.1 hypothetical protein [Salinibacter ruber] diamond 372 63.9 0.993740219092332 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Salinibacteraceae Salinibacter Salinibacter ruber

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;