RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA757618", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Fervidibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Fervidibacterota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA757618 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31475155 31475155 PRJNA757618_P_NODE_35016_length_248_cov_0.891429_g33964_i0 PRJNA757618 35016 248 0.891429 2.21074392 Candidatus Fervidibacter sp. 3100871 Bacteria Bacteria 99 9.11e-25   NR MFA0765128.1 3100871 g33964 i0 59.7 3.73790322580645 77 29 93.1 1 13 243 23 97 MFA0765128.1 hypothetical protein [Candidatus Fervidibacter sp.] diamond 927 99 1 Bacteria Bacteria candidate phyla   Candidatus Fervidibacterota       Candidatus Fervidibacter Candidatus Fervidibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;