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contig_metadata

25 rows where bioproject = "PRJNA756891" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 25 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA756891 · 25 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26831464 26831464 PRJNA756891_P_NODE_16001_length_242_cov_0.911243_g15932_i0 PRJNA756891 16001 242 0.911243 2.20520806 Pedosphaera sp. 2024890 Bacteria Bacteria 66.6 1.43e-10   NR MDB6121029.1 2024890 g15932 i0 49.4 1.02892561983471 83 39 99.2 2 241 2 859 941 MDB6121029.1 hypothetical protein [Pedosphaera sp.] diamond 249 66.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Pedosphaerae Pedosphaerales Pedosphaeraceae Pedosphaera Pedosphaera sp.
27179166 27179166 PRJNA756891_P_NODE_1422_length_682_cov_1.885057_g1358_i0 PRJNA756891 1422 682 1.885057 12.85608874 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 110 8.36e-25   NR HEY5911529.1 2499141 g1358 i0 40.7 1.62316715542522 189 100 81.4 5 560 6 32 212 HEY5911529.1 phosphate ABC transporter substrate-binding protein PstS [Verrucomicrobiia bacterium] diamond 1107 110 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
27315799 27315799 PRJNA756891_P_NODE_1683_length_632_cov_7.023256_g1616_i0 PRJNA756891 1683 632 7.023256 44.38697792 PVC group 1783257 Bacteria Bacteria 58.9 3.03e-6   NR MEI8312125.1 2026799 g1616 i0 31.6 1.27689873417722 155 85 65.5 5 200 613 18 168 MEI8312125.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 807 59.3 0.993254637436762 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27590221 27590221 PRJNA756891_P_NODE_1684_length_632_cov_6.157424_g1617_i0 PRJNA756891 1684 632 6.157424 38.91491968 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 58.2 5.53e-6   NR MEI8312125.1 2026799 g1617 i0 31.6 1.30063291139241 155 85 65.5 5 200 613 18 168 MEI8312125.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 822 58.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27789419 27789419 PRJNA756891_P_NODE_13304_length_248_cov_0.880000_g13235_i0 PRJNA756891 13304 248 0.88 2.1824 Bacteria 2 Bacteria Bacteria 95.9 7.94e-21   NR MCX6901516.1 2026799 g13235 i0 55.6 4.8991935483871 81 36 98 0 5 247 212 292 MCX6901516.1 PAS domain S-box protein [Verrucomicrobiota bacterium] diamond 1215 96.7 0.991726990692865 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27884003 27884003 PRJNA756891_P_NODE_3805_length_430_cov_0.823529_g3736_i0 PRJNA756891 3805 430 0.823529 3.5411747 Verrucomicrobiota 74201 Bacteria Bacteria 171 1.94e-47   NR HLP09976.1 2006848 g3736 i0 61.5 12.0139534883721 143 55 99.8 0 429 1 256 398 HLP09976.1 NAD-dependent malic enzyme [Opitutaceae bacterium] diamond 5166 172 0.994186046511628 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
27905503 27905503 PRJNA756891_P_NODE_15065_length_244_cov_0.900585_g14996_i0 PRJNA756891 15065 244 0.900585 2.1974274 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 53.1 8.02e-6   NR PYI49799.1 2026799 g14996 i0 28.4 2.98770491803279 81 57 99.6 1 244 2 109 188 PYI49799.1 MAG: hypothetical protein DMF11_00075, partial [Verrucomicrobiota bacterium] diamond 729 53.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28347783 28347783 PRJNA756891_P_NODE_1226_length_730_cov_3.683409_g1163_i0 PRJNA756891 1226 730 3.683409 26.8888857 Luteolibacter sp. 1962973 Bacteria Bacteria 122 1.53e-29   NR MFT4176339.1 1962973 g1163 i0 35.7 0.908219178082192 221 140 90.8 2 729 67 55 273 MFT4176339.1 choice-of-anchor A family protein [Luteolibacter sp.] diamond 663 122 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp.
28474175 28474175 PRJNA756891_P_NODE_2566_length_522_cov_1.028953_g2498_i0 PRJNA756891 2566 522 1.028953 5.37113466 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 48.9 0.00318   NR HEY8903288.1 2201154 g2498 i0 22.3 1.00574712643678 175 133 98.9 2 2 517 152 326 HEY8903288.1 tetratricopeptide repeat protein [Chthoniobacterales bacterium] diamond 525 48.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
28547327 28547327 PRJNA756891_P_NODE_1387_length_689_cov_1.425325_g1323_i0 PRJNA756891 1387 689 1.425325 9.82048925 Bacteria 2 Bacteria Bacteria 263 1.28e-81   NR MDD3180849.1 2006848 g1323 i0 57.7 12.6792452830189 208 87 90.6 1 624 1 10 216 MDD3180849.1 NAD-dependent malic enzyme [Opitutaceae bacterium] diamond 8736 263 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
28758214 28758214 PRJNA756891_P_NODE_12047_length_251_cov_1.123596_g11978_i0 PRJNA756891 12047 251 1.123596 2.82022596 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 44.7 0.0085   NR PYJ55986.1 2026799 g11978 i0 41.9 1.48207171314741 62 31 72.9 2 217 35 55 112 PYJ55986.1 MAG: hypothetical protein DME24_23605 [Verrucomicrobiota bacterium] diamond 372 44.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28758217 28758217 PRJNA756891_P_NODE_14727_length_245_cov_0.895349_g14658_i0 PRJNA756891 14727 245 0.895349 2.19360505 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 136 7.33e-39   NR PYI68843.1 2026799 g14658 i0 83.8 3.86938775510204 80 13 98 0 242 3 35 114 PYI68843.1 MAG: hypothetical protein DMF07_00800 [Verrucomicrobiota bacterium] diamond 948 136 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29042613 29042613 PRJNA756891_P_NODE_388_length_1192_cov_1.808758_g353_i0 PRJNA756891 388 1192 1.808758 21.56039536 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 194 1.0299999999999999e-54   NR HEV3410536.1 2201154 g353 i0 35.4 0.860738255033557 342 172 83.3 8 168 1160 21 324 HEV3410536.1 fatty acid desaturase [Chthoniobacterales bacterium] diamond 1026 194 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
29484225 29484225 PRJNA756891_P_NODE_15730_length_243_cov_0.905882_g15661_i0 PRJNA756891 15730 243 0.905882 2.20129326 Opitutia bacterium 2026771 Bacteria Bacteria 62.4 4.45e-9   NR MBC9890093.1 2026771 g15661 i0 37 0.901234567901235 73 45 90.1 1 243 25 330 401 MBC9890093.1 SIS domain-containing protein [Opitutia bacterium] diamond 219 62.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia       Opitutia bacterium
29736840 29736840 PRJNA756891_P_NODE_12210_length_251_cov_0.865169_g12141_i0 PRJNA756891 12210 251 0.865169 2.17157419 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 145 3.79e-38   NR HEX7515928.1 2201154 g12141 i0 86.7 0.99203187250996006 83 11 99.2 0 2 250 378 460 HEX7515928.1 O-antigen ligase family protein [Chthoniobacterales bacterium] diamond 249 145 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
29831772 29831772 PRJNA756891_P_NODE_16831_length_227_cov_2.512987_g16762_i0 PRJNA756891 16831 227 2.512987 5.70448049 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 47 9.66e-4   NR RYD77759.1 2026800 g16762 i0 40.8 1.00440528634361 76 44 99.1 1 2 226 465 540 RYD77759.1 MAG: hypothetical protein EOP84_15150, partial [Verrucomicrobiaceae bacterium] diamond 228 47 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
30147455 30147455 PRJNA756891_P_NODE_15072_length_244_cov_0.900585_g15003_i0 PRJNA756891 15072 244 0.900585 2.1974274 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 130 4.81e-33   NR MEP6777806.1 2201154 g15003 i0 92 3.68852459016393 75 6 92.2 0 236 12 192 266 MEP6777806.1 translation initiation factor IF-2 [Chthoniobacterales bacterium] diamond 900 130 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
31674496 31674496 PRJNA756891_P_NODE_4877_length_382_cov_1.993528_g4808_i0 PRJNA756891 4877 382 1.993528 7.61527696 Bacteria 2 Bacteria Bacteria 92.8 4.85e-19   NR HUS35346.1 2499141 g4808 i0 41.4 4.21727748691099 133 62 97.4 4 5 376 402 527 HUS35346.1 glutamine--tRNA ligase/YqeY domain fusion protein [Verrucomicrobiia bacterium] diamond 1611 93.6 0.991452991452991 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
31800964 31800964 PRJNA756891_P_NODE_11837_length_253_cov_2.377778_g11768_i0 PRJNA756891 11837 253 2.377778 6.01577834 Candidatus Udaeobacter 1921511 Bacteria Bacteria 132 6.49e-34   NR PYK16690.1 2026799 g11768 i0 80.6 9.43873517786561 72 14 85.4 0 24 239 438 509 PYK16690.1 MAG: hypothetical protein DME55_11710 [Verrucomicrobiota bacterium] diamond 2388 132 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31917855 31917855 PRJNA756891_P_NODE_15937_length_242_cov_0.911243_g15868_i0 PRJNA756891 15937 242 0.911243 2.20520806 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 99 6.02e-22   NR PYL00862.1 2026799 g15868 i0 61.5 3.34710743801653 65 25 80.6 0 29 223 291 355 PYL00862.1 MAG: hypothetical protein DME19_03735 [Verrucomicrobiota bacterium] diamond 810 99 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31917857 31917857 PRJNA756891_P_NODE_17_length_3125_cov_3.289974_g15_i0 PRJNA756891 17 3125 3.289974 102.8116875 Prosthecobacter vanneervenii 48466 Bacteria Bacteria 53.9 0.0066   NR WP_221306153.1 48466 g15 i0 23.3 0.28032 292 152 22.5 8 1685 984 7335 7612 WP_221306153.1 beta strand repeat-containing protein [Prosthecobacter vanneervenii] diamond 876 53.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter vanneervenii
32139396 32139396 PRJNA756891_P_NODE_8578_length_296_cov_2.000000_g8509_i0 PRJNA756891 8578 296 2 5.92 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 116 5.270000000000001e-29   NR PYI97833.1 2026799 g8509 i0 58.4 7.18581081081081 89 37 90.2 0 272 6 2 90 PYI97833.1 MAG: NADPH:quinone reductase [Verrucomicrobiota bacterium] diamond 2127 116 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32551002 32551002 PRJNA756891_P_NODE_79_length_1977_cov_3.434874_g69_i0 PRJNA756891 79 1977 3.434874 67.90745898 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 63.9 1.26e-7   NR RYD41621.1 2026800 g69 i0 29.9 0.283763277693475 187 91 27.6 5 1320 1865 11 162 RYD41621.1 MAG: ankyrin repeat domain-containing protein [Verrucomicrobiaceae bacterium] diamond 561 63.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
32676511 32676511 PRJNA756891_P_NODE_4240_length_408_cov_1.785075_g4171_i0 PRJNA756891 4240 408 1.785075 7.283106 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 86.3 1.92e-17   NR PYJ14598.1 2026799 g4171 i0 61.4 0.419117647058824 57 21 41.9 1 172 2 43 98 PYJ14598.1 MAG: DNA ligase, partial [Verrucomicrobiota bacterium] diamond 171 86.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32865569 32865569 PRJNA756891_P_NODE_10180_length_274_cov_1.283582_g10111_i0 PRJNA756891 10180 274 1.283582 3.51701468 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 71.2 5.25e-12   NR HYR21671.1 2201154 g10111 i0 46.6 1.5985401459854 73 35 79.9 1 258 40 204 272 HYR21671.1 LamG domain-containing protein [Chthoniobacterales bacterium] diamond 438 71.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;