RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA756891" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA756891 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26609519 26609519 PRJNA756891_P_NODE_121_length_1750_cov_4.051878_g107_i0 PRJNA756891 121 1750 4.051878 70.907865 Chlamydiales bacterium 2047757 Bacteria Bacteria 454 4.759999999999999e-148   NR MFT5319030.1 2047757 g107 i0 42.9 0.946285714285714 552 222 93.3 11 1672 41 14 480 MFT5319030.1 5-histidylcysteine sulfoxide synthase/putative 4-mercaptohistidine N1-methyltransferase [Chlamydiales bacterium] diamond 1656 454 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
27400714 27400714 PRJNA756891_P_NODE_3583_length_442_cov_2.742547_g3514_i0 PRJNA756891 3583 442 2.742547 12.12205774 Simkania negevensis 83561 Bacteria Bacteria 221 1.74e-66   NR WP_013942714.1 83561 g3514 i0 72.6 0.990950226244344 146 40 99.1 0 442 5 41 186 WP_013942714.1 hypothetical protein [Simkania negevensis] diamond 438 221 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania negevensis
28852786 28852786 PRJNA756891_P_NODE_3168_length_469_cov_2.318182_g3100_i0 PRJNA756891 3168 469 2.318182 10.87227358 Simkania negevensis 83561 Bacteria Bacteria 166 2.31e-45   NR WP_013942714.1 83561 g3100 i0 59.3 0.927505330490405 145 52 88.3 4 469 56 175 319 WP_013942714.1 hypothetical protein [Simkania negevensis] diamond 435 166 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania negevensis
29958096 29958096 PRJNA756891_P_NODE_11131_length_262_cov_2.269841_g11062_i0 PRJNA756891 11131 262 2.269841 5.94698342 Rhabdochlamydiaceae symbiont of Dictyostelium giganteum 3342349 Bacteria Bacteria 70.5 8.31e-12   NR WP_404665309.1 3342349 g11062 i0 42.4 1.9236641221374 85 48 97.3 1 258 4 380 463 WP_404665309.1 hypothetical protein [Rhabdochlamydiaceae symbiont of Dictyostelium giganteum] diamond 504 70.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae symbiont of Dictyostelium giganteum
30842909 30842909 PRJNA756891_P_NODE_15734_length_243_cov_0.905882_g15665_i0 PRJNA756891 15734 243 0.905882 2.20129326 Chlamydiales bacterium 2047757 Bacteria Bacteria 105 2.25e-24   NR MFT5318489.1 2047757 g15665 i0 62.5 1.97530864197531 80 28 98.8 1 2 241 1077 1154 MFT5318489.1 malate synthase [Chlamydiales bacterium] diamond 480 105 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
31696403 31696403 PRJNA756891_P_NODE_2977_length_485_cov_3.550971_g2909_i0 PRJNA756891 2977 485 3.550971 17.22220935 Simkania sp. 34094 Bacteria Bacteria 61.2 1.15e-7   NR MCB1083284.1 34094 g2909 i0 32.7 0.964948453608247 156 90 89.7 4 1 435 135 286 MCB1083284.1 hypothetical protein [Simkania sp.] diamond 468 61.2 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
32560761 32560761 PRJNA756891_P_NODE_9539_length_282_cov_1.473684_g9470_i0 PRJNA756891 9539 282 1.473684 4.15578888 Pseudomonadati 3379134 Bacteria Bacteria 87.4 1.15e-17   NR MCX6991192.1 2081524 g9470 i0 44 1.90425531914894 91 51 96.8 0 8 280 421 511 MCX6991192.1 cache domain-containing protein [Chlamydiota bacterium] diamond 537 87.4 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;