RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA756891" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA756891 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29074215 29074215 PRJNA756891_P_NODE_16468_length_241_cov_0.916667_g16399_i0 PRJNA756891 16468 241 0.916667 2.20916747 Candidatus Saccharimonadia bacterium 2890869 Bacteria Bacteria 43.9 0.0142   NR HSX07112.1 2890869 g16399 i0 38.4 0.908713692946058 73 40 90.9 2 226 8 166 233 HSX07112.1 choice-of-anchor U domain-containing protein [Candidatus Saccharimonadia bacterium] diamond 219 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium
29462412 29462412 PRJNA756891_P_NODE_14250_length_246_cov_0.890173_g14181_i0 PRJNA756891 14250 246 0.890173 2.18982558 Candidatus Saccharimonas 1331051 Bacteria Bacteria 168 1.89e-49   NR RKW03354.1 1917697 g14181 i0 100 1.97560975609756 81 0 98.8 0 245 3 97 177 RKW03354.1 MAG: trehalase, partial [Candidatus Saccharimonas sp.] diamond 486 168 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
31980997 31980997 PRJNA756891_P_NODE_4158_length_412_cov_1.979351_g4089_i0 PRJNA756891 4158 412 1.979351 8.15492612 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 45.1 0.0335   NR MBQ6409844.1 2026720 g4089 i0 40 0.618932038834951 85 37 57.5 4 304 68 261 337 MBQ6409844.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 255 45.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;