RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA756891", tax_phylum = "Candidatus Bathyarchaeota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Candidatus Bathyarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA756891 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27432428 27432428 PRJNA756891_P_NODE_763_length_903_cov_2.874699_g712_i0 PRJNA756891 763 903 2.874699 25.95853197 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 108 5.8599999999999996e-24   NR MEJ5327789.1 3045160 g712 i0 35.5 4.00664451827243 245 128 80.4 4 809 84 11 228 MEJ5327789.1 tryptophan-rich sensory protein [Candidatus Bathyarchaeia archaeon] diamond 3618 108 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
29147370 29147370 PRJNA756891_P_NODE_7189_length_321_cov_1.862903_g7120_i0 PRJNA756891 7189 321 1.862903 5.97991863 root 1 Root_unresolved Root_unresolved 89.7 9.02e-20   NR MBS7609099.1 2026714 g7120 i0 49.5 6.25233644859813 91 44 83.2 1 319 53 70 160 MBS7609099.1 GNAT family N-acetyltransferase [Candidatus Bathyarchaeota archaeon] diamond 2007 90.1 0.995560488346282 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;