RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA756891" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA756891 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27432421 27432421 PRJNA756891_P_NODE_483_length_1096_cov_2.148583_g445_i0 PRJNA756891 483 1096 2.148583 23.54846968 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 380 2.9199999999999998e-126   NR MCK5003814.1 2052149 g445 i0 56.3 16.8120437956204 334 141 90.6 2 1092 100 123 454 MCK5003814.1 nucleotide sugar dehydrogenase [Candidatus Aminicenantes bacterium] diamond 18426 380 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
30031224 30031224 PRJNA756891_P_NODE_10971_length_264_cov_1.811518_g10902_i0 PRJNA756891 10971 264 1.811518 4.78240752 Pseudomonadati 3379134 Bacteria Bacteria 70.5 1.15e-12   NR UCH97335.1 2052149 g10902 i0 53.2 1.5 62 27 68.2 1 83 262 24 85 UCH97335.1 MAG: GNAT family N-acetyltransferase [Candidatus Aminicenantes bacterium] diamond 396 70.5 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;