contig_metadata
13 rows where bioproject = "PRJNA756891", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9660532 | 9660532 | PRJNA756891_P_NODE_9448_length_283_cov_1.776190_g9379_i0 | PRJNA756891 | 9448 | 283 | 1.77619 | 5.0266177 | root | 1 | Root_unresolved | Root_unresolved | 142 | 2.34e-39 | NR | WP_319409060.1 | 218289 | g9379 | i0 | 68.5 | 20.4381625441696 | 92 | 27 | 97.5 | 1 | 6 | 281 | 113 | 202 | WP_319409060.1 N-carbamoylputrescine amidase [uncultured Desulfosarcina sp.] | diamond | 5784 | 143 | 0.993006993006993 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfosarcinaceae | Desulfosarcina | uncultured Desulfosarcina sp. | ||
| 26989424 | 26989424 | PRJNA756891_P_NODE_5982_length_348_cov_2.054545_g5913_i0 | PRJNA756891 | 5982 | 348 | 2.054545 | 7.1498166 | Geomonas sp. | 2651584 | Bacteria | Bacteria | 92 | 2.74e-20 | NR | HEY5513348.1 | 2651584 | g5913 | i0 | 42.6 | 1.95689655172414 | 115 | 65 | 99.1 | 1 | 4 | 348 | 29 | 142 | HEY5513348.1 CAP domain-containing protein [Geomonas sp.] | diamond | 681 | 92 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geomonas | Geomonas sp. | ||
| 27685078 | 27685078 | PRJNA756891_P_NODE_864_length_862_cov_1.646388_g809_i0 | PRJNA756891 | 864 | 862 | 1.646388 | 14.19186456 | Candidatus Dadabacteria bacterium | 2080303 | Bacteria | Bacteria | 73.2 | 6.26e-12 | NR | NIP30510.1 | 2080303 | g809 | i0 | 38.8 | 0.3584686774942 | 103 | 62 | 35.8 | 1 | 526 | 834 | 42 | 143 | NIP30510.1 Hsp20 family protein [Candidatus Dadabacteria bacterium] | diamond | 309 | 73.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Candidatus Dadabacteria | Candidatus Dadabacteria bacterium | |||||
| 27905508 | 27905508 | PRJNA756891_P_NODE_4105_length_414_cov_2.706745_g4036_i0 | PRJNA756891 | 4105 | 414 | 2.706745 | 11.2059243 | Geobacter sp. | 46610 | Bacteria | Bacteria | 76.3 | 4.61e-14 | NR | HCE66851.1 | 46610 | g4036 | i0 | 47.4 | 1.11594202898551 | 78 | 41 | 56.5 | 0 | 407 | 174 | 120 | 197 | HCE66851.1 CAP domain-containing protein [Geobacter sp.] | diamond | 462 | 76.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sp. | ||
| 28411067 | 28411067 | PRJNA756891_P_NODE_10666_length_268_cov_1.569231_g10597_i0 | PRJNA756891 | 10666 | 268 | 1.569231 | 4.20553908 | Desulfococcaceae bacterium HSG9 | 3055598 | Bacteria | Bacteria | 44.7 | 0.00923 | NR | MDM8540287.1 | 3055598 | g10597 | i0 | 33.3 | 0.973880597014925 | 87 | 57 | 97.4 | 1 | 5 | 265 | 20 | 105 | MDM8540287.1 hypothetical protein [Desulfococcaceae bacterium HSG9] | diamond | 261 | 44.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfococcaceae | Desulfococcaceae bacterium HSG9 | |||
| 28547332 | 28547332 | PRJNA756891_P_NODE_6327_length_339_cov_3.473684_g6258_i0 | PRJNA756891 | 6327 | 339 | 3.473684 | 11.77578876 | root | 1 | Root_unresolved | Root_unresolved | 100 | 7.65e-25 | NR | KAF0220805.1 | 2282154 | g6258 | i0 | 49.5 | 4.21238938053097 | 95 | 47 | 84.1 | 1 | 53 | 337 | 2 | 95 | KAF0220805.1 MAG: chaperonin [Geobacteraceae bacterium] | diamond | 1428 | 100 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacteraceae bacterium | |||
| 29452592 | 29452592 | PRJNA756891_P_NODE_15710_length_243_cov_0.905882_g15641_i0 | PRJNA756891 | 15710 | 243 | 0.905882 | 2.20129326 | Candidatus Electronema halotolerans | 3036122 | Bacteria | Bacteria | 44.3 | 0.0104 | NR | CAK8721456.1 | 3036122 | g15641 | i0 | 54.3 | 0.567901234567901 | 46 | 20 | 56.8 | 1 | 177 | 40 | 211 | 255 | CAK8721456.1 Histone deacetylase domain-containing protein [Candidatus Electronema halotolerans] | diamond | 138 | 44.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Candidatus Electronema | Candidatus Electronema halotolerans | ||
| 30526801 | 30526801 | PRJNA756891_P_NODE_6793_length_329_cov_1.203125_g6724_i0 | PRJNA756891 | 6793 | 329 | 1.203125 | 3.95828125 | Desulfobulbaceae bacterium | 2053307 | Bacteria | Bacteria | 53.9 | 1.16e-5 | NR | HHD57392.1 | 2053307 | g6724 | i0 | 33.3 | 0.90273556231003 | 99 | 54 | 89.4 | 3 | 301 | 8 | 105 | 192 | HHD57392.1 FAD/NAD(P)-binding oxidoreductase [Desulfobulbaceae bacterium] | diamond | 297 | 53.9 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbaceae bacterium | |||
| 30684727 | 30684727 | PRJNA756891_P_NODE_7153_length_322_cov_1.445783_g7084_i0 | PRJNA756891 | 7153 | 322 | 1.445783 | 4.65542126 | Desulforegula conservatrix | 153026 | Bacteria | Bacteria | 116 | 1.58e-28 | NR | WP_027359097.1 | 153026 | g7084 | i0 | 46.7 | 0.996894409937888 | 107 | 55 | 97.8 | 1 | 315 | 1 | 159 | 265 | WP_027359097.1 molecular chaperone DnaJ [Desulforegula conservatrix] | diamond | 321 | 116 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulforegulaceae | Desulforegula | Desulforegula conservatrix | ||
| 32076078 | 32076078 | PRJNA756891_P_NODE_4018_length_419_cov_1.583815_g3949_i0 | PRJNA756891 | 4018 | 419 | 1.583815 | 6.63618485 | Desulfuromonadales bacterium | 2099678 | Bacteria | Bacteria | 123 | 2.56e-33 | NR | NOR49650.1 | 2099678 | g3949 | i0 | 53.9 | 1.63245823389021 | 115 | 47 | 78 | 1 | 15 | 341 | 4 | 118 | NOR49650.1 DUF423 domain-containing protein [Desulfuromonadales bacterium] | diamond | 684 | 123 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadales bacterium | ||||
| 32297937 | 32297937 | PRJNA756891_P_NODE_3259_length_463_cov_1.366667_g3191_i0 | PRJNA756891 | 3259 | 463 | 1.366667 | 6.32766821 | Desulfonema magnum | 45655 | Bacteria | Bacteria | 167 | 7.8e-45 | NR | WP_207683226.1 | 45655 | g3191 | i0 | 51.3 | 4.95680345572354 | 154 | 74 | 99.8 | 1 | 462 | 1 | 145 | 297 | WP_207683226.1 S8 family serine peptidase [Desulfonema magnum] | diamond | 2295 | 167 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfococcaceae | Desulfonema | Desulfonema magnum | ||
| 32297942 | 32297942 | PRJNA756891_P_NODE_7539_length_315_cov_1.272727_g7470_i0 | PRJNA756891 | 7539 | 315 | 1.272727 | 4.00909005 | Desulfovibrio oxyclinae | 63560 | Bacteria | Bacteria | 71.6 | 6.22e-12 | NR | WP_018125246.1 | 63560 | g7470 | i0 | 45.5 | 4.72380952380952 | 88 | 44 | 80 | 1 | 259 | 8 | 495 | 582 | WP_018125246.1 transporter substrate-binding domain-containing protein [Desulfovibrio oxyclinae] | diamond | 1488 | 71.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio oxyclinae | ||
| 32843837 | 32843837 | PRJNA756891_P_NODE_6540_length_334_cov_2.578544_g6471_i0 | PRJNA756891 | 6540 | 334 | 2.578544 | 8.61233696 | Bacteria | 2 | Bacteria | Bacteria | 116 | 3.23e-28 | NR | WP_287703198.1 | 885 | g6471 | i0 | 54.1 | 48.1706586826347 | 109 | 41 | 97.9 | 1 | 6 | 332 | 129 | 228 | WP_287703198.1 iron-containing alcohol dehydrogenase [Desulfovibrio sp.] | diamond | 16089 | 116 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;