RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA756891", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 9 ✖

tax_kingdom 1

  • Bacillati · 9 ✖

bioproject 1

  • PRJNA756891 · 9 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27505328 27505328 PRJNA756891_P_NODE_15063_length_244_cov_0.900585_g14994_i0 PRJNA756891 15063 244 0.900585 2.1974274 Bacillati 1783272 Bacteria Bacteria 100 2.2400000000000002e-22   NR WP_184201416.1 685828 g14994 i0 75.4 11.483606557377 65 16 79.9 0 48 242 4 68 WP_184201416.1 L-fucose isomerase [Armatimonas rosea] diamond 2802 101 0.99009900990099 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
27505336 27505336 PRJNA756891_P_NODE_9563_length_282_cov_1.177033_g9494_i0 PRJNA756891 9563 282 1.177033 3.31923306 Fimbriimonas 1005038 Bacteria Bacteria 88.2 8.71e-19   NR HWD41525.1 1936159 g9494 i0 74.5 1.80851063829787 55 14 58.5 0 4 168 204 258 HWD41525.1 ParA family protein [Fimbriimonas sp.] diamond 510 88.6 0.99548532731377 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
28537465 28537465 PRJNA756891_P_NODE_7367_length_318_cov_1.257143_g7298_i0 PRJNA756891 7367 318 1.257143 3.99771474 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 112 1.7500000000000002e-26   NR MBI1755517.1 1005039 g7298 i0 55.4 0.952830188679245 101 45 95.3 0 316 14 198 298 MBI1755517.1 bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU [Fimbriimonas ginsengisoli] diamond 303 112 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
29831768 29831768 PRJNA756891_P_NODE_13951_length_247_cov_0.885057_g13882_i0 PRJNA756891 13951 247 0.885057 2.18609079 Fimbriimonas sp. 1936159 Bacteria Bacteria 65.1 5.31e-10   NR MEZ0324450.1 1936159 g13882 i0 47.2 0.874493927125506 72 38 87.4 0 246 31 679 750 MEZ0324450.1 UvrD-helicase domain-containing protein [Fimbriimonas sp.] diamond 216 65.1 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
30495417 30495417 PRJNA756891_P_NODE_14593_length_245_cov_0.895349_g14524_i0 PRJNA756891 14593 245 0.895349 2.19360505 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 77 2.16e-14   NR MBI1757253.1 1005039 g14524 i0 54.1 1.04081632653061 85 34 99.2 3 3 245 157 240 MBI1757253.1 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Fimbriimonas ginsengisoli] diamond 255 77 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
31253583 31253583 PRJNA756891_P_NODE_14395_length_246_cov_0.890173_g14326_i0 PRJNA756891 14395 246 0.890173 2.18982558 Fimbriimonadia bacterium 2575566 Bacteria Bacteria 67.8 5.67e-11   NR MEP0766476.1 2575566 g14326 i0 51.2 1.92682926829268 84 36 96.3 3 5 241 175 258 MEP0766476.1 hypothetical protein [Fimbriimonadia bacterium] diamond 474 67.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia       Fimbriimonadia bacterium
31727943 31727943 PRJNA756891_P_NODE_5197_length_371_cov_2.771812_g5128_i0 PRJNA756891 5197 371 2.771812 10.28342252 Armatimonadota bacterium 2033014 Bacteria Bacteria 65.9 1.28e-9   NR MBS1718040.1 2033014 g5128 i0 45.7 0.743935309973046 92 48 73.6 2 15 287 8 98 MBS1718040.1 hypothetical protein [Armatimonadota bacterium] diamond 276 65.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32076084 32076084 PRJNA756891_P_NODE_8778_length_293_cov_1.704545_g8709_i0 PRJNA756891 8778 293 1.704545 4.99431685 Fimbriimonas sp. 1936159 Bacteria Bacteria 110 2.33e-26   NR HWD37521.1 1936159 g8709 i0 53.8 1.90443686006826 93 43 95.2 0 10 288 294 386 HWD37521.1 threonine ammonia-lyase [Fimbriimonas sp.] diamond 558 110 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
32519290 32519290 PRJNA756891_P_NODE_12739_length_250_cov_0.870056_g12670_i0 PRJNA756891 12739 250 0.870056 2.17514 Armatimonadota bacterium 2033014 Bacteria Bacteria 61.6 3.45e-9   NR MFQ6097217.1 2033014 g12670 i0 40.7 0.972 81 40 91.2 2 246 19 43 120 MFQ6097217.1 Kelch repeat-containing protein [Armatimonadota bacterium] diamond 243 61.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;