RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA756891", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA756891 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19859021 19859021 PRJNA756891_P_NODE_1396_length_686_cov_3.675367_g1332_i0 PRJNA756891 1396 686 3.675367 25.21301762 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 359 3.77e-120   NR KAF4687968.1 32597 g1332 i0 74.3 17.5495626822157 222 57 97.1 0 21 686 2 223 KAF4687968.1 Protein transport protein Sec61 subunit alpha [Perkinsus olseni] diamond 12039 361 0.994459833795014 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
27347419 27347419 PRJNA756891_P_NODE_10803_length_266_cov_2.077720_g10734_i0 PRJNA756891 10803 266 2.07772 5.5267352 Dinophyceae 2864 SAR_Eukaryotes SAR_Eukaryotes 74.3 1.34e-13   NR KAF4735487.1 32597 g10734 i0 43.6 6.09022556390977 78 42 88 1 265 32 20 95 KAF4735487.1 Small subunit processome component [Perkinsus olseni] diamond 1620 74.7 0.994645247657296 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;