RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA756891", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA756891 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28947965 28947965 PRJNA756891_P_NODE_11888_length_253_cov_1.333333_g11819_i0 PRJNA756891 11888 253 1.333333 3.37333249 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 46.6 0.00188   NR ETO05050.1 46433 g11819 i0 36.9 0.99604743083004 84 39 86.6 3 20 238 647 727 ETO05050.1 hypothetical protein RFI_32346, partial [Reticulomyxa filosa] diamond 252 46.6 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30084404 30084404 PRJNA756891_P_NODE_5432_length_364_cov_2.116838_g5363_i0 PRJNA756891 5432 364 2.116838 7.70529032 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 114 1.92e-29   NR ETO10631.1 46433 g5363 i0 43.1 2.9010989010989 116 66 95.6 0 16 363 33 148 ETO10631.1 acid ceramidase-like protein [Reticulomyxa filosa] diamond 1056 114 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32329527 32329527 PRJNA756891_P_NODE_5019_length_377_cov_1.773026_g4950_i0 PRJNA756891 5019 377 1.773026 6.68430802 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 73.9 2.08e-12   NR ETO05685.1 46433 g4950 i0 43.5 0.549071618037135 69 38 54.1 1 207 4 501 569 ETO05685.1 hypothetical protein RFI_31711, partial [Reticulomyxa filosa] diamond 207 73.9 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32392455 32392455 PRJNA756891_P_NODE_10859_length_266_cov_1.321244_g10790_i0 PRJNA756891 10859 266 1.321244 3.51450904 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 46.6 0.00223   NR ETO27461.1 46433 g10790 i0 38.7 1.04887218045113 93 50 99.2 3 1 264 1225 1315 ETO27461.1 HECT type ubiquitin ligase [Reticulomyxa filosa] diamond 279 46.6 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;