RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

18 rows where bioproject = "PRJNA756891", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 18 ✖

tax_clade 1

  • Sar · 18 ✖

bioproject 1

  • PRJNA756891 · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2008057 2008057 PRJNA756891_P_NODE_5162_length_373_cov_1.000000_g5093_i0 PRJNA756891 5162 373 1 3.73 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.003   NTclustered gi|1620174044|ref|XM_028682437.1| 880535 g5093 i0 100 0.0804289544235925 30 0 8 0 157 186 994 965 Plasmodium sp. gorilla clade G2 conserved Plasmodium protein, unknown function (PADL01_1035500), partial mRNA blastn 30 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
7110746 7110746 PRJNA756891_P_NODE_7406_length_317_cov_2.274590_g7337_i0 PRJNA756891 7406 317 2.27459 7.2104503 Plasmodium reichenowi 5854 SAR_Eukaryotes SAR_Eukaryotes 58.4 6.38e-4   NTclustered gi|1145258134|ref|XM_012906805.2| 5854 g7337 i0 88.235 0.249211356466877 51 3 16 2 161 211 4380 4333 Plasmodium reichenowi hypothetical protein partial mRNA blastn 79 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
13485810 13485810 PRJNA756891_P_NODE_5091_length_375_cov_1.274834_g5022_i0 PRJNA756891 5091 375 1.274834 4.7806275 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 90.1 4.39e-18   NR KFG62839.1 935652 g5022 i0 39.6 5.856 106 54 84.8 1 319 2 690 785 KFG62839.1 putative histone kinase SNF1, partial [Toxoplasma gondii RUB] diamond 2196 90.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
14760974 14760974 PRJNA756891_P_NODE_6392_length_338_cov_1.403774_g6323_i0 PRJNA756891 6392 338 1.403774 4.74475612 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 231 3.8199999999999995e-56   NTclustered gi|1620150562|ref|XM_028678648.1| 85471 g6323 i0 79.635 54.4940828402367 329 61 96 6 2 327 782 457 Plasmodium relictum polyubiquitin, putative (PRELSG_1312500), partial mRNA blastn 18419 231 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
15230807 15230807 PRJNA756891_P_NODE_9232_length_286_cov_1.920188_g9163_i0 PRJNA756891 9232 286 1.920188 5.49173768 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 58.4 5.68e-4   NTclustered gi|1145258288|ref|XM_012906887.2| 5854 g9163 i0 94.595 1.64685314685315 37 2 13 0 105 141 646 682 Plasmodium reichenowi hypothetical protein partial mRNA blastn 471 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
19054001 19054001 PRJNA756891_P_NODE_8155_length_304_cov_1.333333_g8086_i0 PRJNA756891 8155 304 1.333333 4.05333232 Plasmodium vinckei petteri 138298 SAR_Eukaryotes SAR_Eukaryotes 154 8.88e-46   NR EUD71171.1 138298 g8086 i0 70.3 3.98684210526316 101 30 99.7 0 303 1 12 112 EUD71171.1 eukaryotic translation initiation factor 5A-2 [Plasmodium vinckei petteri] diamond 1212 154 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
19859047 19859047 PRJNA756891_P_NODE_2236_length_557_cov_1.681818_g2168_i0 PRJNA756891 2236 557 1.681818 9.36772626 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.004   NTclustered gi|82540450|ref|XM_719449.1| 5861 g2168 i0 96.97 0.059245960502693 33 1 6 0 185 217 496 464 Plasmodium yoelii PUB domain-containing protein, putative (PY17X_1426000), partial mRNA blastn 33 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
19859075 19859075 PRJNA756891_P_NODE_7156_length_322_cov_1.236948_g7087_i0 PRJNA756891 7156 322 1.236948 3.98297256 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.008   NTclustered gi|2795620672|ref|XM_068064366.1| 483139 g7087 i0 100 5.40062111801242 29 0 9 0 62 90 484 456 Cystoisospora suis spc97 spc98 family protein (CSUI_004173), mRNA blastn 1739 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
21604435 21604435 PRJNA756891_P_NODE_6817_length_329_cov_0.863281_g6748_i0 PRJNA756891 6817 329 0.863281 2.84019449 root 1 Root_unresolved Root_unresolved 54.7 0.009   NTclustered gi|296004811|ref|XM_002808712.1| 36329 g6748 i0 100 0.279635258358663 29 0 9 0 137 165 3459 3431 Plasmodium falciparum 3D7 importin-7, putative (PF3D7_0706000), partial mRNA blastn 92 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
26619553 26619553 PRJNA756891_P_NODE_2541_length_524_cov_1.241685_g2473_i0 PRJNA756891 2541 524 1.241685 6.5064294 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 170 7.03e-50   NR EDL42590.1 5855 g2473 i0 57.4 7.09351145038168 136 57 77.9 1 101 508 15 149 EDL42590.1 cyclophilin, putative [Plasmodium vivax] diamond 3717 171 0.994152046783626 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vivax
26768087 26768087 PRJNA756891_P_NODE_12141_length_251_cov_0.865169_g12072_i0 PRJNA756891 12141 251 0.865169 2.17157419 Theileria orientalis 68886 SAR_Eukaryotes SAR_Eukaryotes 154 3.12e-44   NR UKK02294.2 68886 g12072 i0 90.4 4.9601593625498 83 8 99.2 0 2 250 73 155 UKK02294.2 putative ADP/ATP transporter [Theileria orientalis] diamond 1245 154 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
26967764 26967764 PRJNA756891_P_NODE_7202_length_321_cov_1.552419_g7133_i0 PRJNA756891 7202 321 1.552419 4.98326499 root 1 Root_unresolved Root_unresolved 124 2.9799999999999997e-30   NR XP_029220325.1 94643 g7133 i0 51 8.75700934579439 104 51 97.2 0 2 313 134 237 XP_029220325.1 hypothetical protein BESB_045080 [Besnoitia besnoiti] diamond 2811 125 0.992 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
27053018 27053018 PRJNA756891_P_NODE_3042_length_479_cov_6.793103_g2974_i0 PRJNA756891 3042 479 6.793103 32.53896337 Babesia sp. Xinjiang 462227 SAR_Eukaryotes SAR_Eukaryotes 47.8 0.00623   NR XP_028872201.1 462227 g2974 i0 29.2 0.707724425887265 113 58 65.8 5 358 44 265 363 XP_028872201.1 Ubiquitin fusion degradation protein 1 -like protein [Babesia sp. Xinjiang] diamond 339 47.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia sp. Xinjiang
27874171 27874171 PRJNA756891_P_NODE_11385_length_259_cov_1.650538_g11316_i0 PRJNA756891 11385 259 1.650538 4.27489342 Cryptosporidium felis 83540 SAR_Eukaryotes SAR_Eukaryotes 70.1 1.11e-11   NR KAF7455933.1 83540 g11316 i0 49.3 0.822393822393822 71 36 82.2 0 235 23 1 71 KAF7455933.1 U3 small nucleolar RNA-associated protein 6 [Cryptosporidium felis] diamond 213 70.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis
27874176 27874176 PRJNA756891_P_NODE_14605_length_245_cov_0.895349_g14536_i0 PRJNA756891 14605 245 0.895349 2.19360505 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 46.6 9.36e-4   NR XP_028867159.1 189622 g14536 i0 35.7 4.78775510204082 56 35 68.6 1 70 237 107 161 XP_028867159.1 Polyubiqutin 1, putative [Babesia ovata] diamond 1173 46.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
28221343 28221343 PRJNA756891_P_NODE_10546_length_269_cov_3.556122_g10477_i0 PRJNA756891 10546 269 3.556122 9.56596818 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 117 1.1e-29   NR XP_013435839.1 51315 g10477 i0 70.2 0.936802973977695 84 24 93.7 1 18 269 15 97 XP_013435839.1 lactoylglutathione lyase, putative [Eimeria necatrix] diamond 252 117 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
30757941 30757941 PRJNA756891_P_NODE_3734_length_434_cov_2.011080_g3665_i0 PRJNA756891 3734 434 2.01108 8.7280872 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 127 1.31e-32   NR XP_067182875.1 310047 g3665 i0 48.3 3.00691244239631 145 72 99.5 3 434 3 71 213 XP_067182875.1 7 pass integral membrane with FLHWFHH motif shared with fatty-acyl elongase [Cryptosporidium bovis] diamond 1305 127 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium bovis
30811217 30811217 PRJNA756891_P_NODE_8654_length_295_cov_1.387387_g8585_i0 PRJNA756891 8654 295 1.387387 4.09279165 Babesia gibsoni 33632 SAR_Eukaryotes SAR_Eukaryotes 58.5 1.82e-7   NR KAK1444879.1 33632 g8585 i0 39.3 0.854237288135593 84 45 85.4 3 253 2 43 120 KAK1444879.1 creatinase/aminopeptidase like protein [Babesia gibsoni] diamond 252 58.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia gibsoni

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;