RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA753704" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA753704 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6306018 6306018 PRJNA753704_P_NODE_10205_length_369_cov_8.577703_g9844_i0 PRJNA753704 10205 369 8.577703 31.65172407 Polycystididae 39194 Platyhelminthes Platyhelminthes 126 2.0399999999999994e-24   NTclustered gi|667755593|gb|KJ887527.1| 1525023 g9844 i0 94.048 25.1924119241192 84 3 22 2 275 357 90 8 Djeziraia euxinica voucher DNA517SARIII 28S ribosomal RNA gene, partial sequence blastn 9296 126 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Rhabdocoela Polycystididae Djeziraia Djeziraia euxinica
10130742 10130742 PRJNA753704_P_NODE_28208_length_242_cov_1.840237_g27847_i0 PRJNA753704 28208 242 1.840237 4.45337354 Opisthokonta 33154 Platyhelminthes Platyhelminthes 110 7.34e-26   NR VDP90137.1 27848 g27847 i0 62 34.3636363636364 79 30 97.9 0 3 239 354 432 VDP90137.1 unnamed protein product [Echinostoma caproni] diamond 8316 110 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Echinostomatidae Echinostoma Echinostoma caproni
11405818 11405818 PRJNA753704_P_NODE_15329_length_306_cov_2.811159_g14968_i0 PRJNA753704 15329 306 2.811159 8.60214654 Stenostomum 39238 Platyhelminthes Platyhelminthes 549 8.3e-152   NTclustered gi|209968707|gb|FJ384870.1| 52061 g14968 i0 99.02 54.7875816993464 306 3 100 0 1 306 368 673 Stenostomum leucops isolate K05_55 28S ribosomal RNA gene, partial sequence blastn 16765 549 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
16033653 16033653 PRJNA753704_P_NODE_19973_length_272_cov_1.442211_g19612_i0 PRJNA753704 19973 272 1.442211 3.92281392 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 71.3 6.89e-8   NTclustered gi|690519192|emb|LN070222.1| 99802 g19612 i0 92 0.617647058823529 50 4 20 0 83 132 3390 3439 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0067727 blastn 168 71.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
18582879 18582879 PRJNA753704_P_NODE_17995_length_284_cov_9.374408_g17634_i0 PRJNA753704 17995 284 9.374408 26.62331872 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 488 1.6899999999999999e-133   NTclustered gi|28273263|gb|AY157151.1| 52061 g17634 i0 97.552 63.5880281690141 286 5 100 2 1 284 8 293 Stenostomum leucops 28S large subunit ribosomal RNA gene, partial sequence blastn 18059 488 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
22408351 22408351 PRJNA753704_P_NODE_12278_length_339_cov_1.684211_g11917_i0 PRJNA753704 12278 339 1.684211 5.70947529 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 582 9.179999999999996e-162   NTclustered gi|68479954|gb|DQ076149.1| 6182 g11917 i0 97.64 1 339 8 100 0 1 339 13 351 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 339 582 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
27442303 27442303 PRJNA753704_P_NODE_27083_length_245_cov_0.906977_g26722_i0 PRJNA753704 27083 245 0.906977 2.22209365 Schistosoma 6181 Platyhelminthes Platyhelminthes 65.5 1.09e-10   NR XP_018646131.1 6183 g26722 i0 58.8 18.5632653061224 51 21 62.4 0 92 244 11 61 XP_018646131.1 rab15, 13, 10, 1, 35, 5, and, putative [Schistosoma mansoni] diamond 4548 65.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
32896889 32896889 PRJNA753704_P_NODE_14180_length_317_cov_2.266393_g13819_i0 PRJNA753704 14180 317 2.266393 7.18446581 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 126 3.1499999999999993e-34   NR PAA66860.1 282301 g13819 i0 57.3 1.94952681388013 103 43 96.5 1 2 307 68 170 PAA66860.1 hypothetical protein BOX15_Mlig024683g1 [Macrostomum lignano] diamond 618 126 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;