RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA753704" and tax_phylum = "Haptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Haptophyta · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA753704 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27337497 27337497 PRJNA753704_P_NODE_29763_length_231_cov_2.468354_g29402_i0 PRJNA753704 29763 231 2.468354 5.70189774 Diacronema lutheri 2081491 Haptophyta other_Eukaryota 126 9.539999999999999e-32   NR KAG8459520.1 2081491 g29402 i0 80.3 0.987012987012987 76 15 98.7 0 3 230 138 213 KAG8459520.1 hypothetical protein KFE25_012855 [Diacronema lutheri] diamond 228 126 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri
28379323 28379323 PRJNA753704_P_NODE_13186_length_328_cov_1.223529_g12825_i0 PRJNA753704 13186 328 1.223529 4.01317512 Prymnesium parvum 97485 Haptophyta other_Eukaryota 72 5.35e-12   NR KAL1502925.1 97485 g12825 i0 31.4 1.10670731707317 121 66 97 3 7 324 170 288 KAL1502925.1 hypothetical protein AB1Y20_010997 [Prymnesium parvum] diamond 363 72 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
30337724 30337724 PRJNA753704_P_NODE_23792_length_252_cov_1.525140_g23431_i0 PRJNA753704 23792 252 1.52514 3.8433528 Diacronema lutheri 2081491 Haptophyta other_Eukaryota 53.9 4.86e-6   NR KAG8462137.1 2081491 g23431 i0 44 5.59523809523809 50 28 59.5 0 2 151 754 803 KAG8462137.1 hypothetical protein KFE25_011587 [Diacronema lutheri] diamond 1410 53.9 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;