RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA753704" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA753704 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3282384 3282384 PRJNA753704_P_NODE_23343_length_253_cov_1.961111_g22982_i0 PRJNA753704 23343 253 1.961111 4.96161083 Asterias rubens 7604 Echinodermata other_Eukaryota 143 2.63e-40   NR XP_033635647.1 7604 g22982 i0 75 13.9446640316206 84 21 99.6 0 253 2 68 151 XP_033635647.1 40S ribosomal protein S4, X isoform-like isoform X2 [Asterias rubens] diamond 3528 143 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
30400940 30400940 PRJNA753704_P_NODE_28033_length_243_cov_0.917647_g27672_i0 PRJNA753704 28033 243 0.917647 2.22988221 Asterias rubens 7604 Echinodermata other_Eukaryota 86.3 1.21e-19   NR XP_033626914.1 7604 g27672 i0 57 1.91358024691358 79 30 97.5 3 242 6 21 95 XP_033626914.1 gamma-aminobutyric acid receptor-associated protein-like 2 [Asterias rubens] diamond 465 86.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
30842885 30842885 PRJNA753704_P_NODE_26434_length_246_cov_1.202312_g26073_i0 PRJNA753704 26434 246 1.202312 2.95768752 Asterias rubens 7604 Echinodermata other_Eukaryota 63.2 7.49e-10   NR XP_033630533.1 7604 g26073 i0 51.5 0.804878048780488 66 31 79.3 1 201 7 1 66 XP_033630533.1 apolipoprotein D-like [Asterias rubens] diamond 198 63.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
31348602 31348602 PRJNA753704_P_NODE_19016_length_278_cov_1.521951_g18655_i0 PRJNA753704 19016 278 1.521951 4.23102378 Patiria miniata 46514 Echinodermata other_Eukaryota 70.5 5.08e-12   NR XP_038047847.1 46514 g18655 i0 43.8 1.56474820143885 73 41 78.8 0 4 222 105 177 XP_038047847.1 mitogen-activated protein kinase kinase kinase 20-like [Patiria miniata] diamond 435 70.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
32022640 32022640 PRJNA753704_P_NODE_17198_length_290_cov_3.073733_g16837_i0 PRJNA753704 17198 290 3.073733 8.9138257 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 85.1 3.33e-17   NR XP_030830040.1 7668 g16837 i0 46.3 1.97586206896552 95 41 98.3 2 285 1 219 303 XP_030830040.1 cathepsin B [Strongylocentrotus purpuratus] diamond 573 85.5 0.9953216374269 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
32812358 32812358 PRJNA753704_P_NODE_14380_length_315_cov_2.475207_g14019_i0 PRJNA753704 14380 315 2.475207 7.79690205 root 1 Root_unresolved Root_unresolved 58.9 1.74e-7   NR XP_033626464.1 7604 g14019 i0 34.2 5.47619047619048 79 34 75.2 1 287 51 312 372 XP_033626464.1 peroxidase 2-like [Asterias rubens] diamond 1725 58.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;