RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA753704" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 6 ✖

bioproject 1

  • PRJNA753704 · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21604220 21604220 PRJNA753704_P_NODE_23857_length_252_cov_0.871508_g23496_i0 PRJNA753704 23857 252 0.871508 2.19620016 Tobamovirus 12234 Viruses Viruses 466 6.89e-127   NTclustered gi|2431684801|gb|ON557629.1| 12239 g23496 i0 100 98.8095238095238 252 0 100 0 1 252 1833 1582 Pepper mild mottle virus isolate G07, partial genome blastn 24900 466 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus capsici
27590193 27590193 PRJNA753704_P_NODE_11824_length_345_cov_1.147059_g11463_i0 PRJNA753704 11824 345 1.147059 3.95735355 Ripegast virus 3130561 Viruses Viruses 121 7.48e-32   NR WZH59875.1 3130561 g11463 i0 53.2 0.947826086956522 109 49 94.8 1 13 339 65 171 WZH59875.1 MAG: RNA-dependent RNA polymerase, partial [Ripegast virus] diamond 327 121 1 Viruses   Orthornavirae Negarnaviricota Ellioviricetes Bunyavirales     Ripegast virus
27968886 27968886 PRJNA753704_P_NODE_27505_length_244_cov_0.912281_g27144_i0 PRJNA753704 27505 244 0.912281 2.22596564 Salarius guttatus piscichuvirus 2951531 Viruses Viruses 69.3 1.62e-11   NR UVF58767.1 2951531 g27144 i0 45.6 0.971311475409836 79 42 95.9 1 236 3 1 79 UVF58767.1 MAG: L protein [Salarius guttatus piscichuvirus] diamond 237 69.3 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus Salarius guttatus piscichuvirus
29958087 29958087 PRJNA753704_P_NODE_8031_length_411_cov_2.032544_g7670_i0 PRJNA753704 8031 411 2.032544 8.35375584 Erysiphe necator associated negative-stranded RNA virus 4 2737071 Viruses Viruses 54.7 1.63e-5   NR QJW70357.1 2737071 g7670 i0 31.3 1.92700729927007 131 80 92.7 3 388 8 1192 1316 QJW70357.1 RNA-dependent RNA polymerase [Erysiphe necator associated negative-stranded RNA virus 4] diamond 792 54.7 1 Viruses   Orthornavirae Negarnaviricota         Erysiphe necator associated negative-stranded RNA virus 4
32244439 32244439 PRJNA753704_P_NODE_27778_length_243_cov_1.376471_g27417_i0 PRJNA753704 27778 243 1.376471 3.34482453 African cichlid piscichuvirus 3065075 Viruses Viruses 48.1 4.74e-4   NR YP_010797603.1 3065075 g27417 i0 32.9 2.64197530864198 76 43 86.4 2 6 215 46 119 YP_010797603.1 L protein [Wenling fish chu-like virus] diamond 642 48.1 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus
32875365 32875365 PRJNA753704_P_NODE_22620_length_257_cov_1.695652_g22259_i0 PRJNA753704 22620 257 1.695652 4.35782564 African cichlid piscichuvirus 3065075 Viruses Viruses 73.9 4.71e-13   NR WLN26256.1 3065075 g22259 i0 56.3 2.21789883268483 64 28 74.7 0 194 3 229 292 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 570 73.9 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;