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contig_metadata

20 rows where bioproject = "PRJNA753704" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 20 ✖

bioproject 1

  • PRJNA753704 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3282283 3282283 PRJNA753704_P_NODE_14923_length_310_cov_1.670886_g14562_i0 PRJNA753704 14923 310 1.670886 5.1797466 Chlorophyta 3041 Plants Plants 165 2.6799999999999997e-45   NR KAF8059167.1 2742167 g14562 i0 75.8 13.1806451612903 99 24 95.8 0 299 3 451 549 KAF8059167.1 RPS4 [Scenedesmus sp. PABB004] diamond 4086 166 0.993975903614458 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
3282301 3282301 PRJNA753704_P_NODE_16463_length_296_cov_3.923767_g16102_i0 PRJNA753704 16463 296 3.923767 11.61435032 Prototheca wickerhamii 3111 Plants Plants 128 4.44e-25   NTclustered gi|14212|emb|X68722.1| 3111 g16102 i0 85.156 48.4560810810811 128 16 43 3 1 127 2239 2364 P.wickerhamii mitochondrial gene for large ribosomal RNA blastn 14343 128 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
4559666 4559666 PRJNA753704_P_NODE_9484_length_381_cov_1.857143_g9123_i0 PRJNA753704 9484 381 1.857143 7.07571483 Eukaryota 2759 Plants Plants 95.9 4.2e-20   NR KAK2076826.1 3111 g9123 i0 38.5 6.98425196850394 130 74 99.2 2 380 3 272 399 KAK2076826.1 hypothetical protein QBZ16_005052 [Prototheca wickerhamii] diamond 2661 95.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
12210511 12210511 PRJNA753704_P_NODE_19310_length_276_cov_1.536946_g18949_i0 PRJNA753704 19310 276 1.536946 4.24197096 Dunaliella salina 3046 Plants Plants 73.1 1.95e-8   NTclustered gi|383930345|ref|NC_016732.1| 3046 g18949 i0 87.692 41.2355072463768 65 5 23 2 134 197 133610 133548 Dunaliella salina chloroplast, complete genome blastn 11381 73.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
12681763 12681763 PRJNA753704_P_NODE_29490_length_233_cov_3.087500_g29129_i0 PRJNA753704 29490 233 3.0875 7.193875 Eukaryota 2759 Plants Plants 431 2.2899999999999996e-116   NTclustered gi|1201359270|gb|MF040792.1| 3078 g29129 i0 100 99.9914163090129 233 0 100 0 1 233 108 340 Auxenochlorella pyrenoidosa isolate HIT9 18S ribosomal RNA gene, partial sequence blastn 23298 431 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
14760118 14760118 PRJNA753704_P_NODE_6032_length_467_cov_10.647208_g5671_i0 PRJNA753704 6032 467 10.647208 49.72246136 Jaagichlorella hainangensis 445995 Plants Plants 276 2.47e-69   NTclustered gi|1863124765|ref|NC_048968.1| 445995 g5671 i0 79.009 25.2612419700214 424 73 89 16 51 466 5692 5277 Jaagichlorella hainangensis culture CGMCC:NO7101 mitochondrion, complete genome blastn 11797 276 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Jaagichlorella Jaagichlorella hainangensis
16033574 16033574 PRJNA753704_P_NODE_13333_length_326_cov_2.889328_g12972_i0 PRJNA753704 13333 326 2.889328 9.41920928 Helicosporidium sp. ex Simulium jonesi 145475 Plants Plants 183 1.04e-41   NTclustered gi|386800430|ref|NC_017841.1| 145475 g12972 i0 77.37 51.8803680981595 327 62 98 9 1 318 10717 11040 Helicosporidium sp. ex Simulium jonesi mitochondrion, complete genome blastn 16913 183 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Helicosporidium Helicosporidium sp. ex Simulium jonesi
17779708 17779708 PRJNA753704_P_NODE_1474_length_895_cov_5.086375_g1168_i0 PRJNA753704 1474 895 5.086375 45.52305625 Marvania 97104 Plants Plants 91.6 1.91e-13   NTclustered gi|2724824493|gb|PP746561.1| 97105 g1168 i0 88.312 0.391061452513966 77 8 8 1 814 889 48115 48191 Marvania geminata culture SAG:12.88 mitochondrion, complete genome blastn 350 91.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Marvania Marvania geminata
21133639 21133639 PRJNA753704_P_NODE_25297_length_249_cov_0.886364_g24936_i0 PRJNA753704 25297 249 0.886364 2.20704636 Eukaryota 2759 Plants Plants 155 6.949999999999998e-42   NR PRW58449.1 3076 g24936 i0 82.9 18.5421686746988 82 14 98.8 0 248 3 408 489 PRW58449.1 isoleucine--tRNA cytoplasmic isoform B [Chlorella sorokiniana] diamond 4617 156 0.993589743589744 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
27147282 27147282 PRJNA753704_P_NODE_22042_length_260_cov_1.957219_g21681_i0 PRJNA753704 22042 260 1.957219 5.0887694 Chlorella vulgaris 3077 Plants Plants 47.4 0.00111   NR KAL4857278.1 3077 g21681 i0 57.1 0.807692307692308 35 15 40.4 0 107 3 1134 1168 KAL4857278.1 RNA-binding protein 28 [Chlorella vulgaris] diamond 210 47.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
27189018 27189018 PRJNA753704_P_NODE_22862_length_256_cov_1.245902_g22501_i0 PRJNA753704 22862 256 1.245902 3.18950912 Eukaryota 2759 Plants Plants 157 1.6799999999999994e-42   NR XP_011396004.1 3075 g22501 i0 96.5 47.7890625 85 3 99.6 0 2 256 260 344 XP_011396004.1 ATP synthase subunit beta, mitochondrial [Auxenochlorella protothecoides] diamond 12234 158 0.993670886075949 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
29452572 29452572 PRJNA753704_P_NODE_19990_length_272_cov_1.206030_g19629_i0 PRJNA753704 19990 272 1.20603 3.2804016 Tetrabaena socialis 47790 Plants Plants 55.5 1.83e-6   NR PNH12233.1 47790 g19629 i0 33.7 3.04411764705882 86 56 93.8 1 15 269 936 1021 PNH12233.1 hypothetical protein TSOC_000852 [Tetrabaena socialis] diamond 828 55.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Tetrabaenaceae Tetrabaena Tetrabaena socialis
29958076 29958076 PRJNA753704_P_NODE_11971_length_343_cov_1.881481_g11610_i0 PRJNA753704 11971 343 1.881481 6.45347983 Edaphochlamys debaryana 47281 Plants Plants 46.6 0.00529   NR KAG2496099.1 47281 g11610 i0 50 0.384839650145773 44 22 38.5 0 19 150 187 230 KAG2496099.1 hypothetical protein HYH03_005702 [Edaphochlamys debaryana] diamond 132 46.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
30125715 30125715 PRJNA753704_P_NODE_24212_length_251_cov_1.752809_g23851_i0 PRJNA753704 24212 251 1.752809 4.39955059 Chlorella 3071 Plants Plants 134 3.4199999999999992e-34   NR PRW60989.1 3076 g23851 i0 78.3 4.9601593625498 83 18 99.2 0 249 1 63 145 PRW60989.1 fructose-bisphosphate cytoplasmic isozyme [Chlorella sorokiniana] diamond 1245 134 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
30220618 30220618 PRJNA753704_P_NODE_25392_length_248_cov_4.622857_g25031_i0 PRJNA753704 25392 248 4.622857 11.46468536 root 1 Root_unresolved Root_unresolved 129 1.92e-32   NR XP_002952964.1 3068 g25031 i0 64.2 24.6048387096774 81 29 98 0 244 2 277 357 XP_002952964.1 uncharacterized protein VOLCADRAFT_105776 [Volvox carteri f. nagariensis] diamond 6102 130 0.992307692307692 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
30242580 30242580 PRJNA753704_P_NODE_26992_length_245_cov_0.906977_g26631_i0 PRJNA753704 26992 245 0.906977 2.22209365 Micractinium sp. CCAP 211/92 554058 Plants Plants 89.4 1.51e-18   NR KAL4439440.1 554058 g26631 i0 59.5 0.96734693877551 79 31 96.7 1 243 7 630 707 KAL4439440.1 hypothetical protein ABPG77_008769 [Micractinium sp. CCAP 211/92] diamond 237 89.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium sp. CCAP 211/92
31000882 31000882 PRJNA753704_P_NODE_28894_length_239_cov_2.240964_g28533_i0 PRJNA753704 28894 239 2.240964 5.35590396 Gonium pectorale 33097 Plants Plants 116 4.86e-28   NR KXZ56375.1 33097 g28533 i0 78.9 1.84518828451883 71 15 89.1 0 19 231 438 508 KXZ56375.1 hypothetical protein GPECTOR_1g332 [Gonium pectorale] diamond 441 116 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
31032629 31032629 PRJNA753704_P_NODE_16395_length_297_cov_1.772321_g16034_i0 PRJNA753704 16395 297 1.772321 5.26379337 [Myrmecia] bisecta 41462 Plants Plants 55.8 1.15e-6   NR KAK9804753.1 41462 g16034 i0 47.4 0.787878787878788 78 41 78.8 0 235 2 11 88 KAK9804753.1 hypothetical protein WJX72_003546 [[Myrmecia] bisecta] diamond 234 55.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
32107636 32107636 PRJNA753704_P_NODE_11178_length_354_cov_1.302491_g10817_i0 PRJNA753704 11178 354 1.302491 4.61081814 Picochlorum sp. BPE23 2696299 Plants Plants 90.1 3.13e-18   NR KAI8105049.1 2696299 g10817 i0 43.9 0.966101694915254 114 62 96.6 1 3 344 420 531 KAI8105049.1 hypothetical protein M9435_000221 [Picochlorum sp. BPE23] diamond 342 90.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. BPE23
32139360 32139360 PRJNA753704_P_NODE_14278_length_316_cov_2.246914_g13917_i0 PRJNA753704 14278 316 2.246914 7.10024824 Monoraphidium minutum 39955 Plants Plants 48.1 0.00115   NR KAI8468921.1 39955 g13917 i0 63.6 0.313291139240506 33 12 31.3 0 224 126 3370 3402 KAI8468921.1 MAG: hypothetical protein J3K34DRAFT_522578 [Monoraphidium minutum] diamond 99 48.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium minutum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;