RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA753704", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA753704 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
730918 730918 PRJNA753704_P_NODE_15441_length_305_cov_2.068966_g15080_i0 PRJNA753704 15441 305 2.068966 6.3103463 root 1 Root_unresolved Root_unresolved 90.1 1.11e-20   NR KAF4711062.1 32597 g15080 i0 78.2 3.25573770491803 55 12 54.1 0 166 2 1 55 KAF4711062.1 hypothetical protein FOZ62_026209, partial [Perkinsus olseni] diamond 993 90.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
13484822 13484822 PRJNA753704_P_NODE_19731_length_273_cov_3.475000_g19370_i0 PRJNA753704 19731 273 3.475 9.48675 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 185 2.3699999999999998e-42   NTclustered gi|347516615|gb|HQ339915.1| 32597 g19370 i0 79.693 20.6410256410256 261 49 95 4 7 265 336 594 Perkinsus olseni strain ALG1 heat shock protein 90 gene, partial cds blastn 5635 185 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
22408540 22408540 PRJNA753704_P_NODE_29678_length_232_cov_2.012579_g29317_i0 PRJNA753704 29678 232 2.012579 4.66918328 Salmoxcellia vastator 2874172 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|2258116978|gb|ON819178.1| 2874172 g29317 i0 96.97 0.142241379310345 33 1 14 0 200 232 6066 6034 Salmoxcellia vastator strain BC241120 internal transcribed spacer region, partial sequence blastn 33 56.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Xcellidae Salmoxcellia Salmoxcellia vastator

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;