RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA753704", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA753704 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12210570 12210570 PRJNA753704_P_NODE_24690_length_250_cov_1.322034_g24329_i0 PRJNA753704 24690 250 1.322034 3.305085 Plasmodium gonderi 77519 SAR_Eukaryotes SAR_Eukaryotes 145 3.63e-30   NTclustered gi|1620954688|ref|XM_028689405.1| 77519 g24329 i0 79.147 2.44 211 42 84 2 2 211 474 265 Plasmodium gonderi 40S ribosomal protein S5 (PGO_126150), partial mRNA blastn 610 145 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gonderi
14759896 14759896 PRJNA753704_P_NODE_15432_length_305_cov_2.400862_g15071_i0 PRJNA753704 15432 305 2.400862 7.3226291 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 215 3.43e-51   NTclustered gi|1620184857|ref|XM_028680586.1| 880535 g15071 i0 79.344 15.1081967213115 305 63 100 0 1 305 669 365 Plasmodium sp. gorilla clade G2 serine/threonine protein phosphatase PP1, putative (PADL01_0035300), partial mRNA blastn 4608 215 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
17779766 17779766 PRJNA753704_P_NODE_22074_length_260_cov_1.668449_g21713_i0 PRJNA753704 22074 260 1.668449 4.3379674 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|915002776|ref|XM_013393443.1| 5801 g21713 i0 100 2.63076923076923 30 0 12 0 1 30 20019 19990 Eimeria acervulina UBA/TS-N domain-containing protein, putative partial mRNA blastn 684 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
19858220 19858220 PRJNA753704_P_NODE_7076_length_435_cov_24.511050_g6715_i0 PRJNA753704 7076 435 24.51105 106.6230675 uncultured Eimeriidae 404735 SAR_Eukaryotes SAR_Eukaryotes 776 0   NTclustered gi|166083980|gb|EF024503.1| 404735 g6715 i0 98.851 70.8091954022989 435 5 100 0 1 435 661 1095 Eimeriidae environmental sample clone Elev_18S_807 18S ribosomal RNA gene, partial sequence blastn 30802 776 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae   uncultured Eimeriidae
22879704 22879704 PRJNA753704_P_NODE_7778_length_417_cov_2.997093_g7417_i0 PRJNA753704 7778 417 2.997093 12.49787781 Eimeria 5800 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.003   NTclustered gi|915125310|ref|XM_013478465.1| 5804 g7417 i0 92.5 0.522781774580336 40 2 10 1 246 285 909 871 Eimeria maxima hypothetical protein, conserved partial mRNA blastn 218 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
24957559 24957559 PRJNA753704_P_NODE_18440_length_282_cov_0.928230_g18079_i0 PRJNA753704 18440 282 0.92823 2.6176086 Plasmodium malariae 5858 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|1624462269|ref|XM_029004567.1| 5858 g18079 i0 100 0.106382978723404 30 0 11 0 103 132 1230 1201 Plasmodium malariae conserved Plasmodium protein, unknown function (PmUG01_08039700), partial mRNA blastn 30 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium malariae
24957618 24957618 PRJNA753704_P_NODE_23960_length_252_cov_0.871508_g23599_i0 PRJNA753704 23960 252 0.871508 2.19620016 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 270 5.7999999999999984e-68   NTclustered gi|820695469|tpe|LN714488.1| 572307 g23599 i0 86.111 1.96031746031746 252 33 100 2 1 252 80739 80490 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 494 270 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
32875363 32875363 PRJNA753704_P_NODE_11120_length_355_cov_1.170213_g10759_i0 PRJNA753704 11120 355 1.170213 4.15425615 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 157 2.09e-46   NR AFJ45055.1 5874 g10759 i0 64.7 20.712676056338 116 41 98 0 2 349 2 117 AFJ45055.1 ribosomal protein S8, partial [Theileria annulata] diamond 7353 157 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;