contig_metadata
11 rows where bioproject = "PRJNA753704", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 730894 | 730894 | PRJNA753704_P_NODE_12381_length_337_cov_7.469697_g12020_i0 | PRJNA753704 | 12381 | 337 | 7.469697 | 25.17287889 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 623 | 5.369999999999999e-174 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g12020 | i0 | 100 | 114.93175074184 | 337 | 0 | 100 | 0 | 1 | 337 | 1251243 | 1251579 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 38732 | 623 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 731102 | 731102 | PRJNA753704_P_NODE_3941_length_564_cov_1.747454_g3583_i0 | PRJNA753704 | 3941 | 564 | 1.747454 | 9.85564056 | Candidatus Syngnamydia salmonis | 504270 | Bacteria | Bacteria | 564 | 5.78e-156 | NTclustered | gi|1214145827|gb|KY427067.1| | 504270 | g3583 | i0 | 84.886 | 113.471631205674 | 569 | 75 | 100 | 10 | 1 | 564 | 2486 | 1924 | Candidatus Syngnamydia salmonis isolate H03/14Pp 16S ribosomal RNA gene, partial sequence; and 16S-23S ribosomal RNA intergenic spacer 23S ribosomal RNA and 5S ribosomal RNA genes, complete sequence | blastn | 63998 | 564 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Candidatus Syngnamydia | Candidatus Syngnamydia salmonis | |
| 2007096 | 2007096 | PRJNA753704_P_NODE_23722_length_252_cov_2.206704_g23361_i0 | PRJNA753704 | 23722 | 252 | 2.206704 | 5.56089408 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 316 | 7.34e-82 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g23361 | i0 | 89.37 | 63.2539682539683 | 254 | 23 | 100 | 3 | 1 | 252 | 1249574 | 1249323 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 15940 | 316 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 3753703 | 3753703 | PRJNA753704_P_NODE_13063_length_329_cov_3.316406_g12702_i0 | PRJNA753704 | 13063 | 329 | 3.316406 | 10.91097574 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 508 | 1.53e-139 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g12702 | i0 | 94.545 | 146.686930091185 | 330 | 16 | 100 | 2 | 1 | 329 | 1250703 | 1250375 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 48260 | 512 | 0.9921875 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 4559534 | 4559534 | PRJNA753704_P_NODE_25644_length_248_cov_0.891429_g25283_i0 | PRJNA753704 | 25644 | 248 | 0.891429 | 2.21074392 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 309 | 1.21e-79 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g25283 | i0 | 89.113 | 53.866935483871 | 248 | 27 | 100 | 0 | 1 | 248 | 1250662 | 1250415 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 13359 | 309 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 14759945 | 14759945 | PRJNA753704_P_NODE_1952_length_779_cov_12.237960_g1621_i0 | PRJNA753704 | 1952 | 779 | 12.23796 | 95.3337084 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 1439 | 0 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g1621 | i0 | 100 | 123.103979460847 | 779 | 0 | 100 | 0 | 1 | 779 | 1249611 | 1250389 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 95898 | 1439 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 16033792 | 16033792 | PRJNA753704_P_NODE_3453_length_601_cov_6.590909_g3097_i0 | PRJNA753704 | 3453 | 601 | 6.590909 | 39.61136309 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 1110 | 0 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g3097 | i0 | 100 | 116.37936772046601 | 601 | 0 | 100 | 0 | 1 | 601 | 1250989 | 1250389 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 69944 | 1110 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 16505039 | 16505039 | PRJNA753704_P_NODE_5813_length_475_cov_2.144279_g5452_i0 | PRJNA753704 | 5813 | 475 | 2.144279 | 10.18532525 | Bacteria | 2 | Bacteria | Bacteria | 490 | 8.269999999999998e-134 | NTclustered | gi|2874253688|emb|OY969414.1| | 174324 | g5452 | i0 | 85.867 | 98.2547368421053 | 467 | 59 | 98 | 5 | 1 | 465 | 2363381 | 2363842 | MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 | blastn | 46671 | 494 | 0.991902834008097 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 23683927 | 23683927 | PRJNA753704_P_NODE_10959_length_357_cov_4.566901_g10598_i0 | PRJNA753704 | 10959 | 357 | 4.566901 | 16.30383657 | Candidatus Rhabdochlamydia oedothoracis | 2720720 | Bacteria | Bacteria | 399 | 1.0499999999999998e-106 | NTclustered | gi|2076407543|gb|CP075587.1| | 2720720 | g10598 | i0 | 86.981 | 134.890756302521 | 361 | 39 | 100 | 8 | 1 | 357 | 1316726 | 1316370 | Candidatus Rhabdochlamydia oedothoracis isolate W744xW776 chromosome, complete genome | blastn | 48156 | 399 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Candidatus Rhabdochlamydia | Candidatus Rhabdochlamydia oedothoracis | |
| 31158385 | 31158385 | PRJNA753704_P_NODE_23575_length_253_cov_0.866667_g23214_i0 | PRJNA753704 | 23575 | 253 | 0.866667 | 2.19266751 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 108 | 1.84e-26 | NR | MCH9631726.1 | 2081524 | g23214 | i0 | 64.3 | 0.99604743083004 | 84 | 30 | 99.6 | 0 | 252 | 1 | 116 | 199 | MCH9631726.1 Ribonuclease Z [Chlamydiota bacterium] | diamond | 252 | 108 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 32613697 | 32613697 | PRJNA753704_P_NODE_27560_length_244_cov_0.912281_g27199_i0 | PRJNA753704 | 27560 | 244 | 0.912281 | 2.22596564 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 98.2 | 5.81e-22 | NR | MBM3194281.1 | 2081524 | g27199 | i0 | 58.8 | 0.983606557377049 | 80 | 33 | 98.4 | 0 | 241 | 2 | 292 | 371 | MBM3194281.1 glycosyltransferase [Chlamydiota bacterium] | diamond | 240 | 98.2 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;