RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA753704", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA753704 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27432398 27432398 PRJNA753704_P_NODE_26503_length_246_cov_0.901734_g26142_i0 PRJNA753704 26503 246 0.901734 2.21826564 Minisyncoccota bacterium 2053589 Bacteria Bacteria 101 3.27e-26   NR MFO0719078.1 2053589 g26142 i0 75.4 0.792682926829268 65 16 79.3 0 195 1 1 65 MFO0719078.1 DUF167 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 195 101 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29484202 29484202 PRJNA753704_P_NODE_21910_length_261_cov_1.537234_g21549_i0 PRJNA753704 21910 261 1.537234 4.01218074 Minisyncoccota bacterium 2053589 Bacteria Bacteria 110 4.99e-26   NR MFA5387552.1 2053589 g21549 i0 60 1.94252873563218 85 34 97.7 0 5 259 355 439 MFA5387552.1 DUF5906 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 507 110 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30716294 30716294 PRJNA753704_P_NODE_16894_length_293_cov_1.413636_g16533_i0 PRJNA753704 16894 293 1.413636 4.14195348 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.9 0.0279   NR MCK9352242.1 2053589 g16533 i0 29.9 1.09556313993174 107 56 98.3 4 292 5 1013 1111 MCK9352242.1 DUF2341 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 321 43.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;